Ontology highlight
ABSTRACT:
SUBMITTER: Hecker N
PROVIDER: S-EPMC4787817 | biostudies-literature | 2015 Sep
REPOSITORIES: biostudies-literature
Hecker Nikolai N Christensen-Dalsgaard Mikkel M Seemann Stefan E SE Havgaard Jakob H JH Stadler Peter F PF Hofacker Ivo L IL Nielsen Henrik H Gorodkin Jan J
Nucleic acids research 20150817 17
A key aspect of RNA secondary structure prediction is the identification of novel functional elements. This is a challenging task because these elements typically are embedded in longer transcripts where the borders between the element and flanking regions have to be defined. The flanking sequences impact the folding of the functional elements both at the level of computational analyses and when the element is extracted as a transcript for experimental analysis. Here, we analyze how different fl ...[more]