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CrossDocker: a tool for performing cross-docking using Autodock Vina.

ABSTRACT: BACKGROUND:Cross-docking is an approach to find the best holo structures among multiple structures available for a target protein. RESULTS:CrossDocker significantly decreases the time needed for setting parameters and inputs for performing multiple dockings, data collection and subsequent analysis. CONCLUSION:CrossDocker was written in Python language and is available as executable binary for Windows operating system. It is available at http://www.pharm-sbg.com. Some example data sets were also provided.

SUBMITTER: Shamsara J

PROVIDER: S-EPMC4797978 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

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CrossDocker: a tool for performing cross-docking using Autodock Vina.

Shamsara Jamal J

SpringerPlus 20160317

<h4>Background</h4>Cross-docking is an approach to find the best holo structures among multiple structures available for a target protein.<h4>Results</h4>CrossDocker significantly decreases the time needed for setting parameters and inputs for performing multiple dockings, data collection and subsequent analysis.<h4>Conclusion</h4>CrossDocker was written in Python language and is available as executable binary for Windows operating system. It is available at http://www.pharm-sbg.com. Some exampl ...[more]

PMID: 27652002

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Vinardo: A Scoring Function Based on Autodock Vina Improves Scoring, Docking, and Virtual Screening.

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