Dataset Information

Morphometric and molecular identification of Paradactylogyrus catlaius (Thapar 1948) in Catla catla (Hamilton 1822).

ABSTRACT: Paradactylogyrus are small monogenean ectoparasites found mostly on the gills of Cyprinidae and are highly host specific. Conventionally these parasites are identified by microscopic analysis. In contrast to this conventional method, molecular identification using nuclear ribosomal DNA (rDNA) provides specific, sensitive and safe detection of parasites. The present study is aimed to identify the Paradactylogyrus on Catla catla using morphological and molecular tools. Morphologically the parasite is having hamuli, marginal hooks, bars and copulatory organs which differentiate it from other monogeneans. The parasite is having unpaired central spine, tubular cirrus and extracaecal vitellaria. 28s rDNA study revealed that the species is P. catlaius and the sequence was submitted to Genbank (accession no. KF269531). The study suggests that morphological characters along with molecular study are essential for validating and identifying the monogeneans. This is the first published sequence of species from the genus Paradactylogyrus (Thapar 1948).

SUBMITTER: Rana N

PROVIDER: S-EPMC4815865 | biostudies-literature | 2016 Mar

REPOSITORIES: biostudies-literature

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Publications

Morphometric and molecular identification of Paradactylogyrus catlaius (Thapar 1948) in Catla catla (Hamilton 1822).

Rana Nibedita N Das Basanta K BK

Journal of parasitic diseases : official organ of the Indian Society for Parasitology 20140228 1

Paradactylogyrus are small monogenean ectoparasites found mostly on the gills of Cyprinidae and are highly host specific. Conventionally these parasites are identified by microscopic analysis. In contrast to this conventional method, molecular identification using nuclear ribosomal DNA (rDNA) provides specific, sensitive and safe detection of parasites. The present study is aimed to identify the Paradactylogyrus on Catla catla using morphological and molecular tools. Morphologically the parasite ...[more]

PMID: 27065594

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Project description:The present study, for the first time, reported twelve A2M isoforms in Tenualosa ilisha, through SMRT sequencing. Hilsa shad, T. ilisha, an anadromous fish, faces environmental stresses and is thus prone to diseases. Here, expression profiles of different A2M isoforms in four tissues were studied in T. ilisha, for the tissue specific diversity of A2M. Large scale high quality full length transcripts (>0.99% accuracy) were obtained from liver, ovary, testes and gill transcriptomes, through Iso-sequencing on PacBio RSII. A total of 12 isoforms, with complete putatative proteins, were detected in three tissues (7 isoforms in liver, 4 in ovary and 1 in testes). Complete structure of A2M mRNA was predicted from these isoforms, containing 4680 bp sequence, 35 exons and 1508 amino acids. With Homo sapiens A2M as reference, six functional domains (A2M_N,A2M_N2, A2M, Thiol-ester_cl, Complement and Receptor domain), along with a bait region, were predicted in A2M consensus protein. A total of 35 splice sites were identified in T. ilisha A2M consensus transcript, with highest frequency (55.7%) of GT-AG splice sites, as compared to that of Homo sapiens. Liver showed longest isoform (X1) consisting of all domains, while smallest (X10) was found in ovary with one Receptor domain. Present study predicted five putative markers (I-212, I-269, A-472, S-567 and Y-906) for EUS disease resistance in A2M protein, which were present in MG2 domains (A2M_N and A2M_N2), by comparing with that of resistant and susceptible/unknown response species. These markers classified fishes into two groups, resistant and susceptible response. Potential markers, predicted in T. ilisha, placed it to be EUS susceptible category. Putative markers reported in A2M protein may serve as molecular markers in diagnosis of EUS disease resistance/susceptibility in fishes and may have a potential for inclusion in the marker panel for pilot studies. Further, challenging studies are required to confirm the role of particular A2M isoforms and markers identified in immune protection against EUS disease.

Dataset Information

Morphometric and molecular identification of Paradactylogyrus catlaius (Thapar 1948) in Catla catla (Hamilton 1822).

Publications

Morphometric and molecular identification of Paradactylogyrus catlaius (Thapar 1948) in Catla catla (Hamilton 1822).

Similar Datasets

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