Dataset Information

The mid-domain effect in ectomycorrhizal fungi: range overlap along an elevation gradient on Mount Fuji, Japan.

ABSTRACT: Mid-domain effect (MDE) models predict that the random placement of species' ranges within a bounded geographical area leads to increased range overlap and species richness in the center of the bounded area. These models are frequently applied to study species-richness patterns of macroorganisms, but the MDE in relation to microorganisms is poorly understood. In this study, we examined the characteristics of the MDE in richness patterns of ectomycorrhizal (EM) fungi, an ecologically important group of soil symbionts. We conducted intensive soil sampling to investigate overlap among species ranges and the applicability of the MDE to EM fungi in four temperate forest stands along an elevation gradient on Mount Fuji, Japan. Molecular analyses using direct sequencing revealed 302 EM fungal species. Of 73 EM fungal species found in multiple stands, 72 inhabited a continuous range along the elevation gradient. The maximum overlap in species range and the highest species richness occurred at elevations in the middle of the gradient. The observed richness pattern also fit within the 95% confidence interval of the mid-domain null model, supporting the role of the MDE in EM fungal richness. Deviation in observed richness from the mean of the mid-domain null estimation was negatively correlated with some environmental factors, including precipitation and soil C/N, indicating that unexplained richness patterns could be driven by these environmental factors. Our results clearly support the existence of microbial species' ranges along environmental gradients and the potential applicability of the MDE to better understand microbial diversity patterns.

SUBMITTER: Miyamoto Y

PROVIDER: S-EPMC4817612 | biostudies-literature | 2014 Aug

REPOSITORIES: biostudies-literature

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The mid-domain effect in ectomycorrhizal fungi: range overlap along an elevation gradient on Mount Fuji, Japan.

Miyamoto Yumiko Y Nakano Takashi T Hattori Masahira M Nara Kazuhide K

The ISME journal 20140313 8

Mid-domain effect (MDE) models predict that the random placement of species' ranges within a bounded geographical area leads to increased range overlap and species richness in the center of the bounded area. These models are frequently applied to study species-richness patterns of macroorganisms, but the MDE in relation to microorganisms is poorly understood. In this study, we examined the characteristics of the MDE in richness patterns of ectomycorrhizal (EM) fungi, an ecologically important gr ...[more]

PMID: 24621523

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Project description:Background and aimsSoil respiration is the second-largest terrestrial carbon (C) flux, and soil temperature and soil moisture are the main drivers of temporal variation in soil respiration and its components. Here, we quantified the contribution of soil temperature, soil moisture, and their intersection on the variation in soil respiration and its components of the evergreen broad-leaved forests (EBF), mixed evergreen and deciduous broad-leaved forests (MF), deciduous broad-leaved forests (DBF), and subalpine coniferous forests (CF) along an elevation gradient.MethodsWe measured soil respiration of four types of forests along the elevation gradient in Shennongjia, Hubei China based on the trenching experiments. We parameterized the relationships between soil respiration and soil temperature, soil moisture, and quantified the intersection of temperature and moisture on soil respiration and its components.ResultsTotal soil respiration (R S), heterotrophic respiration (R H), and autotrophic respiration (R A) were significantly correlated with soil temperature in all four forests. The Q 10 value of soil respiration significantly differed among the four types of forest, and the Q 10 was 3.06 for EBF, 3.75 for MF, 4.05 for DBF, and 4.49 for CF, respectively. The soil temperature explained 62%-81% of the variation in respiration, while soil temperature and soil moisture together explained 91%-97% of soil respiration variation for the four types of forests. The variation from the intersection of soil temperature and moisture were 12.1%-25.0% in RS, 1.0%-7.0% in R H, and 17.1%-19.6% in R A, respectively.ConclusionsOur results show that the temperature sensitivity (Q 10) of soil respiration increased with elevation. The intersection between soil temperature and soil moisture had strong effects on soil respiration, especially in R H. We demonstrated that the intersection effects between soil temperature and soil moisture on soil respiration were essential to understand the response of soil respiration and its components to climate change.

Project description:Urbanization is increasing worldwide and is regarded a major threat to biodiversity in forests. As consequences of intensive human use, the vegetation structure of naturally growing urban forests and their amount of deadwood can be reduced. Deadwood is an essential resource for various saproxylic insects and fungi. We assessed the effects of urbanization and forest characteristics on saproxylic insects and fungi. We exposed standardized bundles consisting of each three freshly cut beech and oak branches in 25 forests along a rural-urban gradient in Basel (Switzerland). After an exposure of 8 months, we extracted the saproxylic insects for 10 months using an emergence trap for each bundle. We used drilling chips from each branch to determine fungal operational taxonomic units (OTUs). In all, 193,534 insect individuals emerged from the experimental bundles. Our study showed that the abundance of total saproxylic insects, bark beetles, longhorn beetles, total flies, moths, and ichneumonid wasps decreased with increasing degree of urbanization, but not their species richness. However, the taxonomic composition of all insect groups combined was altered by wood moisture of branches and that of saproxylic beetles was influenced by the degree of urbanization. Unexpectedly, forest size and local forest characteristics had a minor effect on saproxylic insects. ITS (internal transcribed spacer of rDNA) analysis with fungal specific primers revealed a total of 97 fungal OTUs on the bundles. The number of total fungal OTUs decreased with increasing degree of urbanization and was affected by the volume of naturally occurring fine woody debris. The composition of fungal OTUs was altered by the degree of urbanization and pH of the branch wood. As a consequence of the altered compositions of saproxylics, the association between total saproxylic insects and fungi changed along the rural-urban gradient. Our study shows that urbanization can negatively impact saproxylic insects and fungi.

Dataset Information

The mid-domain effect in ectomycorrhizal fungi: range overlap along an elevation gradient on Mount Fuji, Japan.

Publications

The mid-domain effect in ectomycorrhizal fungi: range overlap along an elevation gradient on Mount Fuji, Japan.

Similar Datasets

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