Unknown

Dataset Information

0

(Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans.


ABSTRACT: Despite having serious clinical manifestations, Cellulosimicrobium cellulans remain under-reported with only three genome sequences available at the time of writing. Genome sequences of C. cellulans LMG16121, C. cellulans J36 and Cellulosimicrobium sp. strain MM were used to determine distribution of pathogenicity islands (PAIs) across C. cellulans, which revealed 49 potential marker genes with known association to human infections, e.g. Fic and VbhA toxin-antitoxin system. Oligonucleotide composition-based analysis of orthologous proteins (n?=?791) across three genomes revealed significant negative correlation (P?

SUBMITTER: Sharma A 

PROVIDER: S-EPMC4858710 | biostudies-literature | 2016 May

REPOSITORIES: biostudies-literature

altmetric image

Publications

(Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans.

Sharma Anukriti A   Gilbert Jack A JA   Lal Rup R  

Scientific reports 20160506


Despite having serious clinical manifestations, Cellulosimicrobium cellulans remain under-reported with only three genome sequences available at the time of writing. Genome sequences of C. cellulans LMG16121, C. cellulans J36 and Cellulosimicrobium sp. strain MM were used to determine distribution of pathogenicity islands (PAIs) across C. cellulans, which revealed 49 potential marker genes with known association to human infections, e.g. Fic and VbhA toxin-antitoxin system. Oligonucleotide compo  ...[more]

Similar Datasets

| S-EPMC3233015 | biostudies-literature
| S-EPMC7491936 | biostudies-literature
| S-EPMC1458353 | biostudies-literature
| PRJNA182076 | ENA
| PRJNA202326 | ENA
| PRJNA202341 | ENA
| PRJNA209578 | ENA