Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Crystal structure of 4-carbamoylpyridinium chloride.

ABSTRACT: The hydro-chloride salt of isonicotinamide, C6H7N2O(+)·Cl(-), has been synthesized from a dilute solution of hydro-chloric acid in aceto-nitrile. The compound displays monoclinic symmetry (space group C2/c) at 150?K, similar to the related hydro-chloride salt of nicotinamide. The asymmetric unit contains one protonated isonicotinamide mol-ecule and a chloride anion. An array of hydrogen-bonding inter-actions, including a peculiar bifurcated pyridinium-chloride inter-action, results in linear chains running almost perpendicularly in the [150] and [1-50] directions within the structure. A description of the hydrogen-bonding network and comparison with similar compounds are presented.

SUBMITTER: Fellows SM

PROVIDER: S-EPMC4910348 | biostudies-literature | 2016 Apr

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Crystal structure of 4-carbamoylpyridinium chloride.

Fellows Simon M SM Prior Timothy J TJ

Acta crystallographica. Section E, Crystallographic communications 20160304 Pt 4

The hydro-chloride salt of isonicotinamide, C6H7N2O(+)·Cl(-), has been synthesized from a dilute solution of hydro-chloric acid in aceto-nitrile. The compound displays monoclinic symmetry (space group C2/c) at 150 K, similar to the related hydro-chloride salt of nicotinamide. The asymmetric unit contains one protonated isonicotinamide mol-ecule and a chloride anion. An array of hydrogen-bonding inter-actions, including a peculiar bifurcated pyridinium-chloride inter-action, results in linear cha ...[more]

PMID: 27375858

Similar Datasets

Crystal structure of 2,2-di-phenyl-hydrazinium chloride.

Project description:In the title compound, C12H13N2 (+)·Cl(-), the chloride salt of 1,1'-di-phenyl-hydrazine, the phenyl rings are inclined to one another by 78.63?(17)°. The N-(+)NH3 bond lengths is 1.445?(3)?Å, and the N-Cphen-yl bond lengths are 1.435?(3) and 1.447?(4)?Å. In the crystal, mol-ecules are linked via N-H?Cl hydrogen bonds, forming chains along [10-1], which enclose two adjacent R (4) 2(6) ring motifs. The chains are reinforced by C-H?Cl hydrogen bonds.

| S-EPMC4257322 | biostudies-literature

Crystal structure of tin(IV) chloride octa-hydrate.

Project description:The title compound, [SnCl4(H2O)2]·6H2O, was crystallized according to the solid-liquid phase diagram at lower temperatures. It is built-up of SnCl4(H2O)2 octa-hedral units (point group symmetry 2) and lattice water mol-ecules. An intricate three-dimensional network of O-H?O and O-H?Cl hydrogen bonds between the complex molecules and the lattice water molecules is formed in the crystal structure.

| S-EPMC4257401 | biostudies-literature

Crystal structure of 2,6-di-amino-pyridinium chloride.

Project description:The asymmetric unit of the title salt, C5H8N3 (+)·Cl(-), comprises one half of the 2,6-di-amino-pyridinium cation (the other half being completed by the application of mirror symmetry) and one Cl(-) counter-anion, also located on the mirror plane. The amino N atom shows a significant pyramidalization, with a dihedral angle of 30.4 (14)° between the least-squares planes of the amino group and the non-H atoms of the 2,6-di-amino-pyridinium moiety. In the crystal, the cationic mol-ecules and Cl(-) counter-anions are arranged in sheets parallel to (001) consisting of alternating polar and non-polar parts associated with the the Cl(-) anions, pyridinium and amino moieties, and the pyridine rings, respectively. N-H⋯Cl inter-actions within the polar part, as well as slipped π-π inter-actions in the non-polar part, help to establish the three-dimensional network.

| S-EPMC4778825 | biostudies-literature

Crystal structure of vilazodone hydro-chloride methanol monosolvate.

Project description:In the title compound, C26H28N5O2+·Cl-·CH3OH {systematic name: 4-(2-carbamoyl-1-benzo-furan-5-yl)-1-[4-(5-cyano-1H-indol-3-yl)but-yl]piperazin-1-ium chloride methanol monosolvate}, the protonated piperazine ring adopts a chair conformation. The indole ring plane is nearly perpendicular to the benzo-furan ring system, with a dihedral angle of 85.77 (2)°. In the crystal, the organic cations, Cl- anions and methanol solvent mol-ecules are linked by classical N-H⋯O and N-H⋯Cl hydrogen bonds, and weak C-H⋯O and C-H⋯π inter-actions into a three-dimensional supra-molecular architecture.

| S-EPMC5137608 | biostudies-literature

Crystal structure of hy-droxy scandium nitrate chloride.

Project description:Each Sc3+ ion in the title salt, di-μ-hydroxido-bis-[tri-aqua-(nitrato-κ2 O,O')scandium(III)] dichloride, [Sc2(NO3)2(OH)2(H2O)6]Cl2, is coordinated by a nitrate anion, two hydroxide ions and three water mol-ecules to generate a distorted penta-gonal-bipyramidal ScO7 coordination polyhedron. The complete {[(NO3)(μ-OH)Sc(H2O)3]2}2+ ion is generated by crystallographic inversion symmetry. The nitrate anion binds in a bidentate fashion whereas the hydroxide ions are bridged between two Sc centers. Two charge-balancing Cl- ions are located in the outer sphere. In the extended structure, O-H⋯O and O-H⋯Cl hydrogen bonds connect the components into a three-dimensional network.

| S-EPMC6505614 | biostudies-literature

Crystal structure and characterization of magnesium carbonate chloride heptahydrate.

Project description:MgCO3·MgCl2·7H2O is the only known neutral magnesium carbonate containing chloride ions at ambient conditions. According to the literature, only small and twinned crystals of this double salt could be synthesised in a concentrated solution of MgCl2. For the crystal structure solution, single-crystal diffraction was carried out at a synchrotron radiation source. The monoclinic crystal structure (space group Cc) exhibits double chains of MgO octahedra linked by corners, connected by carbonate units and water molecules. The chloride ions are positioned between these double chains parallel to the (100) plane. Dry MgCO3·MgCl2·7H2O decomposes in the air to chlorartinite, Mg2(OH)Cl(CO3)·nH2O (n = 2 or 3). This work includes an extensive characterization of the title compound by powder X-ray diffraction, thermal analysis, SEM and vibrational spectroscopy.

| S-EPMC7404730 | biostudies-literature

Crystal structure of hexa-aqua-dichlorido-ytterbium(III) chloride.

Project description:The crystal structure of the title compound, [YbCl2(H2O)6]Cl, was determined at 110 K. Samples were obtained from evaporated aceto-nitrile solutions containing the title compound, which consists of a [YbCl2(H2O)6](+) cation and a Cl(-) anion. The cations in the title compound sit on a twofold axis and form O-H⋯Cl hydrogen bonds with the nearby Cl(-) anion. The coordination geometry around the metal centre forms a distorted square anti-prism. The ytterbium complex is isotypic with the europium complex [Tambrornino et al. (2014 ▶). Acta Cryst. E70, i27].

| S-EPMC4459311 | biostudies-literature

Crystal structure of seleno-l-cystine di-hydro-chloride.

Project description:Numerous crystal structures are available for the dimeric amino acid cystine. In proteins it is formed by oxidation of the -SH thiol groups of two closely spaced cysteine residues, resulting in the formation of a familiar di-sulfide bridge. The title compound [systematic name: (R,R)-1,1'-dicarb-oxy-2,2'-(diselanedi-yl)diethanaminium dichloride], C6H14N2O4Se2 (2+)·2Cl(-), is the first example of a small mol-ecule structure of the biologically important analogue with a -CH2-Se-Se-CH2- bridging unit. Bond lengths and angles of seleno-l-cystine di-hydro-chloride and its isotypic sulfur analogue l-cystine di-hydro-chloride are compared.

| S-EPMC4459342 | biostudies-literature

Crystal structure of 2-(1H-imidazol-4-yl)ethanaminium chloride.

Project description:The title mol-ecular salt, C5H10N3 (+)·Cl(-), was obtained as by-product in the attempted synthesis of a histamine derivative. The terminal amino group of the starting material is protonated. The Cimidazole-C-C-N(H3)(+) group in the cation is in an anti conformation with a torsion angle of 176.22?(10)°. In the crystal, cations and anions are linked via N-H?N and N-H-Cl hydrogen bonds, forming a two-dimensional network parallel to (10-1). A single weak C-H?Cl hydrogen bond completes a three-dimensional network.

| S-EPMC4420062 | biostudies-literature

Crystal structure of benzyl-tri-phenyl-phospho-nium chloride monohydrate.

Project description:The title compound, Ph3(PhCH2)P(+)·Cl(-)·H2O, was obtained unintentionally as the product of an attempted synthesis of a silver di-thio-carbamate complex using benzyl-tri-phenyl-phospho-nium as the counter-ion. The asymmetric unit consists of a phospho-nium cation and a chloride anion, and a water mol-ecule of crystallization. In the crystal, the chloride ion is linked to the water mol-ecule by an O-H⋯Cl hydrogen bond. The three units are further linked via C-H⋯Cl and C-H⋯O hydrogen bonds and C-H⋯ π inter-actions, forming a three-dimensional structure.

| S-EPMC4459357 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data