RegionReport: Interactive reports for region-level and feature-level genomic analyses.
Ontology highlight
ABSTRACT:
SUBMITTER: Collado-Torres L
PROVIDER: S-EPMC4934510 | biostudies-literature | 2015
REPOSITORIES: biostudies-literature
Publications
regionReport: Interactive reports for region-level and feature-level genomic analyses.
Collado-Torres Leonardo L Jaffe Andrew E AE Leek Jeffrey T JT
F1000Research 20150501
regionReport is an R package for generating detailed interactive reports from region-level genomic analyses as well as feature-level RNA-seq. The report includes quality-control checks, an overview of the results, an interactive table of the genomic regions or features of interest and reproducibility information. regionReport provides specialised reports for exploring DESeq2, edgeR, or derfinder differential expression analyses results. regionReport is also flexible and can easily be expanded wi ...[more]
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