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Genotypic anomaly in Ebola virus strains circulating in Magazine Wharf area, Freetown, Sierra Leone, 2015.


ABSTRACT: The Magazine Wharf area, Freetown, Sierra Leone was a focus of ongoing Ebola virus transmission from late June 2015. Viral genomes linked to this area contain a series of 13 T to C substitutions in a 150 base pair intergenic region downstream of viral protein 40 open reading frame, similar to the Ebolavirus/H.sapiens-wt/SLE/2014/Makona-J0169 strain (J0169) detected in the same town in November 2014. This suggests that recently circulating viruses from Freetown descend from a J0169-like virus.

SUBMITTER: Smits SL 

PROVIDER: S-EPMC4946620 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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Genotypic anomaly in Ebola virus strains circulating in Magazine Wharf area, Freetown, Sierra Leone, 2015.

Smits Saskia L SL   Pas Suzan D SD   Reusken Chantal B CB   Haagmans Bart L BL   Pertile Peirro P   Cancedda Corrado C   Dierberg Kerry K   Wurie Isata I   Kamara Abdul A   Kargbo David D   Caddy Sarah L SL   Arias Armando A   Thorne Lucy L   Lu Jia J   Jah Umaru U   Goodfellow Ian I   Koopmans Marion P MP  

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 20150101 40


The Magazine Wharf area, Freetown, Sierra Leone was a focus of ongoing Ebola virus transmission from late June 2015. Viral genomes linked to this area contain a series of 13 T to C substitutions in a 150 base pair intergenic region downstream of viral protein 40 open reading frame, similar to the Ebolavirus/H.sapiens-wt/SLE/2014/Makona-J0169 strain (J0169) detected in the same town in November 2014. This suggests that recently circulating viruses from Freetown descend from a J0169-like virus. ...[more]

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