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Estimating the mutation load in human genomes.

ABSTRACT: Next-generation sequencing technology has facilitated the discovery of millions of genetic variants in human genomes. A sizeable fraction of these variants are predicted to be deleterious. Here, we review the pattern of deleterious alleles as ascertained in genome sequencing data sets and ask whether human populations differ in their predicted burden of deleterious alleles - a phenomenon known as mutation load. We discuss three demographic models that are predicted to affect mutation load and relate these models to the evidence (or the lack thereof) for variation in the efficacy of purifying selection in diverse human genomes. We also emphasize why accurate estimation of mutation load depends on assumptions regarding the distribution of dominance and selection coefficients - quantities that remain poorly characterized for current genomic data sets.

SUBMITTER: Henn BM

PROVIDER: S-EPMC4959039 | biostudies-literature | 2015 Jun

REPOSITORIES: biostudies-literature

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Estimating the mutation load in human genomes.

Henn Brenna M BM Botigué Laura R LR Bustamante Carlos D CD Clark Andrew G AG Gravel Simon S

Nature reviews. Genetics 20150512 6

Next-generation sequencing technology has facilitated the discovery of millions of genetic variants in human genomes. A sizeable fraction of these variants are predicted to be deleterious. Here, we review the pattern of deleterious alleles as ascertained in genome sequencing data sets and ask whether human populations differ in their predicted burden of deleterious alleles - a phenomenon known as mutation load. We discuss three demographic models that are predicted to affect mutation load and re ...[more]

PMID: 25963372

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