Dataset Information

Global biogeography of microbial nitrogen-cycling traits in soil.

ABSTRACT: Microorganisms drive much of the Earth's nitrogen (N) cycle, but we still lack a global overview of the abundance and composition of the microorganisms carrying out soil N processes. To address this gap, we characterized the biogeography of microbial N traits, defined as eight N-cycling pathways, using publically available soil metagenomes. The relative frequency of N pathways varied consistently across soils, such that the frequencies of the individual N pathways were positively correlated across the soil samples. Habitat type, soil carbon, and soil N largely explained the total N pathway frequency in a sample. In contrast, we could not identify major drivers of the taxonomic composition of the N functional groups. Further, the dominant genera encoding a pathway were generally similar among habitat types. The soil samples also revealed an unexpectedly high frequency of bacteria carrying the pathways required for dissimilatory nitrate reduction to ammonium, a little-studied N process in soil. Finally, phylogenetic analysis showed that some microbial groups seem to be N-cycling specialists or generalists. For instance, taxa within the Deltaproteobacteria encoded all eight N pathways, whereas those within the Cyanobacteria primarily encoded three pathways. Overall, this trait-based approach provides a baseline for investigating the relationship between microbial diversity and N cycling across global soils.

SUBMITTER: Nelson MB

PROVIDER: S-EPMC4961168 | biostudies-literature | 2016 Jul

REPOSITORIES: biostudies-literature

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Global biogeography of microbial nitrogen-cycling traits in soil.

Nelson Michaeline B MB Martiny Adam C AC Martiny Jennifer B H JB

Proceedings of the National Academy of Sciences of the United States of America 20160701 29

Microorganisms drive much of the Earth's nitrogen (N) cycle, but we still lack a global overview of the abundance and composition of the microorganisms carrying out soil N processes. To address this gap, we characterized the biogeography of microbial N traits, defined as eight N-cycling pathways, using publically available soil metagenomes. The relative frequency of N pathways varied consistently across soils, such that the frequencies of the individual N pathways were positively correlated acro ...[more]

PMID: 27432978

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Dataset Information

Global biogeography of microbial nitrogen-cycling traits in soil.

Publications

Global biogeography of microbial nitrogen-cycling traits in soil.

Similar Datasets

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