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A data set from flash X-ray imaging of carboxysomes.


ABSTRACT: Ultra-intense femtosecond X-ray pulses from X-ray lasers permit structural studies on single particles and biomolecules without crystals. We present a large data set on inherently heterogeneous, polyhedral carboxysome particles. Carboxysomes are cell organelles that vary in size and facilitate up to 40% of Earth's carbon fixation by cyanobacteria and certain proteobacteria. Variation in size hinders crystallization. Carboxysomes appear icosahedral in the electron microscope. A protein shell encapsulates a large number of Rubisco molecules in paracrystalline arrays inside the organelle. We used carboxysomes with a mean diameter of 115±26?nm from Halothiobacillus neapolitanus. A new aerosol sample-injector allowed us to record 70,000 low-noise diffraction patterns in 12?min. Every diffraction pattern is a unique structure measurement and high-throughput imaging allows sampling the space of structural variability. The different structures can be separated and phased directly from the diffraction data and open a way for accurate, high-throughput studies on structures and structural heterogeneity in biology and elsewhere.

SUBMITTER: Hantke MF 

PROVIDER: S-EPMC4968195 | biostudies-literature | 2016 Aug

REPOSITORIES: biostudies-literature

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A data set from flash X-ray imaging of carboxysomes.

Hantke Max F MF   Hasse Dirk D   Ekeberg Tomas T   John Katja K   Svenda Martin M   Loh Duane D   Martin Andrew V AV   Timneanu Nicusor N   Larsson Daniel S D DS   van der Schot Gijs G   Carlsson Gunilla H GH   Ingelman Margareta M   Andreasson Jakob J   Westphal Daniel D   Iwan Bianca B   Uetrecht Charlotte C   Bielecki Johan J   Liang Mengning M   Stellato Francesco F   DePonte Daniel P DP   Bari Sadia S   Hartmann Robert R   Kimmel Nils N   Kirian Richard A RA   Seibert M Marvin MM   Mühlig Kerstin K   Schorb Sebastian S   Ferguson Ken K   Bostedt Christoph C   Carron Sebastian S   Bozek John D JD   Rolles Daniel D   Rudenko Artem A   Foucar Lutz L   Epp Sascha W SW   Chapman Henry N HN   Barty Anton A   Andersson Inger I   Hajdu Janos J   Maia Filipe R N C FR  

Scientific data 20160801


Ultra-intense femtosecond X-ray pulses from X-ray lasers permit structural studies on single particles and biomolecules without crystals. We present a large data set on inherently heterogeneous, polyhedral carboxysome particles. Carboxysomes are cell organelles that vary in size and facilitate up to 40% of Earth's carbon fixation by cyanobacteria and certain proteobacteria. Variation in size hinders crystallization. Carboxysomes appear icosahedral in the electron microscope. A protein shell enca  ...[more]

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