Dataset Information

The Ionomic Study of Vegetable Crops.

ABSTRACT: Soil contains various essential and nonessential elements, all of which can be absorbed by plants. Plant ionomics is the study of the accumulation of these elements (the ionome) in plants. The ionomic profile of a plant is affected by various factors, including species, variety, organ, and environment. In this study, we cultivated various vegetable crop species and cultivars under the same field conditions and analyzed the level of accumulation of each element in the edible and nonedible parts using ionomic techniques. The concentration of each element in the edible parts differed between species, which could be partly explained by differences in the types of edible organs (root, leaf, seed, and fruit). For example, the calcium concentration was lower in seeds and fruit than in other organs because of the higher dependency of calcium accumulation on xylem transfer. The concentration of several essential microelements and nonessential elements in the edible parts also varied greatly between cultivars of the same species, knowledge of which will help in the breeding of vegetables that are biofortified or contain lower concentrations of toxic elements. Comparison of the ionomes of the fruit and leaves of tomato (Solanum lycopersicum) and eggplant (S. melongena) indicated that cadmium and boron had higher levels of accumulation in eggplant fruit, likely because of their effective transport in the phloem. We also found that homologous elements that have been reported to share the same uptake/transport system often showed significant correlation only in a few families and that the slopes of these relationships differed between families. Therefore, these differences in the characteristics of mineral accumulation are likely to affect the ionomic profiles of different families.

SUBMITTER: Watanabe T

PROVIDER: S-EPMC4968822 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

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The Ionomic Study of Vegetable Crops.

Watanabe Toshihiro T Maejima Eriko E Yoshimura Tomoko T Urayama Masaru M Yamauchi Aiko A Owadano Masako M Okada Ryosuke R Osaki Mitsuru M Kanayama Yoshinori Y Shinano Takuro T

PloS one 20160801 8

Soil contains various essential and nonessential elements, all of which can be absorbed by plants. Plant ionomics is the study of the accumulation of these elements (the ionome) in plants. The ionomic profile of a plant is affected by various factors, including species, variety, organ, and environment. In this study, we cultivated various vegetable crop species and cultivars under the same field conditions and analyzed the level of accumulation of each element in the edible and nonedible parts u ...[more]

PMID: 27478901

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Project description:Domesticated grain crops evolved from wild plants under human cultivation, losing natural dispersal mechanisms to become dependent upon humans, and showing changes in a suite of other traits, including increasing seed size. There is tendency for seed enlargement during domestication to be viewed as the result of deliberate selection for large seeds by early farmers. However, like some other domestication traits, large seeds may have evolved through natural selection from the activities of people as they gathered plants from the wild, or brought them into cultivation in anthropogenic settings. Alternatively, larger seeds could have arisen via pleiotropic effects or genetic linkage, without foresight from early farmers, and driven by selection that acted on other organs or favored larger plants. We have separated these unconscious selection effects on seed enlargement from those of deliberate selection, by comparing the wild and domesticated forms of vegetable crops. Vegetables are propagated by planting seeds, cuttings, or tubers, but harvested for their edible leaves, stems, or roots, so that seed size is not a direct determinant of yield. We find that landrace varieties of seven vegetable crops have seeds that are 20% to 2.5-times larger than those of their closest wild relatives. These domestication effect sizes fall completely within the equivalent range of 14% to 15.2-times for grain crops, although domestication had a significantly larger overall effect in grain than vegetable crops. Seed enlargement in vegetable crops that are propagated vegetatively must arise from natural selection for larger seeds on the occasions when plants recruit from seed and are integrated into the crop gene pool, or via a genetic link to selection for larger plants or organs. If similar mechanisms operate across all species, then unconscious selection during domestication could have exerted stronger effects on the seed size of our staple crops than previously realized.

Project description:Evaluation of crop N status will assist optimal N management of intensive vegetable production. Simple procedures for monitoring crop N status such as petiole sap [NO 3(-)-N], leaf N content and soil solution [NO 3(-)] were evaluated with indeterminate tomato and muskmelon. Their sensitivity to assess crop N status throughout each crop was evaluated using linear regression analysis against nitrogen nutrition index (NNI) and crop N content. NNI is the ratio between the actual and the critical crop N contents (critical N content is the minimum N content necessary to achieve maximum growth), and is an established indicator of crop N status. Nutrient solutions with four different N concentrations (treatments N1-N4) were applied throughout each crop. Average applied N concentrations were 1, 5, 13 and 22 mmol L(-1) in tomato, and 2, 7, 13 and 21 mmol L(-1) in muskmelon. Respective rates of N were 23, 147, 421 and 672 kg N ha(-1) in tomato, and 28, 124, 245 and 380 kg N ha(-1) in muskmelon. For each N treatment in each crop, petiole sap [NO 3(-)-N] was relatively constant throughout the crop. During both crops, there were very significant (P < 0.001) linear relationships between both petiole sap [NO 3(-)-N] and leaf N content with NNI and with crop N content. In indeterminate tomato, petiole sap [NO 3(-)-N] was very strongly linearly related to NNI (R(2) = 0.88-0.95, P < 0.001) with very similar slope and intercept values on all dates. Very similar relationships were obtained from published data of processing tomato. A single linear regression (R(2) = 0.77, P < 0.001) described the relationship between sap [NO 3(-)-N] and NNI for both indeterminate and processing tomato, each grown under very different conditions. A single sap [NO 3(-)-N] sufficiency value of 1050 mg N L(-1) was subsequently derived for optimal crop N nutrition (at NNI = 1) of tomato grown under different conditions. In muskmelon, petiole sap [NO 3(-)-N] was strongly linearly related to NNI (R(2) = 0.75 - 0.88, P < 0.001) with very similar slope and intercept values for much of the crop (44-72 DAT, days after transplanting). A single linear relationship between sap [NO 3(-)-N] and NNI (R(2) = 0.77, P < 0.001) was derived for this period, but sap sufficiency values could not be derived for muskmelon as NNI values were >1. Relationships between petiole sap [NO 3(-)-N] with crop N content, and leaf N content with both NNI and crop N content had variable slopes and intercept values during the indeterminate tomato and the muskmelon crops. Soil solution [NO 3(-)] in the root zone was not a sensitive indicator of crop N status. Of the three systems examined for monitoring crop/soil N status, petiole sap [NO 3(-)-N] is suggested to be the most useful because of its sensitivity to crop N status and because it can be rapidly analysed on the farm.

Dataset Information

The Ionomic Study of Vegetable Crops.

Publications

The Ionomic Study of Vegetable Crops.

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