Unknown

Dataset Information

0

Crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, from Thermus thermophilus, Sulfolobus tokodaii and Methanocaldococcus jannaschii.


ABSTRACT: The crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, from Thermus thermophilus, Sulfolobus tokodaii and Methanocaldococcus jannaschii were determined and their structural characteristics were analyzed. For PurS from T. thermophilus, two structures were determined using two crystals that were grown in different conditions. The four structures in the dimeric form were almost identical to one another despite their relatively low sequence identities. This is also true for all PurS structures determined to date. A few residues were conserved among PurSs and these are located at the interaction site with PurL and PurQ, the other subunits of the formylglycinamide ribonucleotide amidotransferase. Molecular-dynamics simulations of the PurS dimer as well as a model of the complex of the PurS dimer, PurL and PurQ suggest that PurS plays some role in the catalysis of the enzyme by its bending motion.

SUBMITTER: Watanabe Y 

PROVIDER: S-EPMC4973304 | biostudies-literature | 2016 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

Crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, from Thermus thermophilus, Sulfolobus tokodaii and Methanocaldococcus jannaschii.

Watanabe Yuzo Y   Yanai Hisaaki H   Kanagawa Mayumi M   Suzuki Sakiko S   Tamura Satoko S   Okada Kiyoshi K   Baba Seiki S   Kumasaka Takashi T   Agari Yoshihiro Y   Chen Lirong L   Fu Zheng Qing ZQ   Chrzas John J   Wang Bi Cheng BC   Nakagawa Noriko N   Ebihara Akio A   Masui Ryoji R   Kuramitsu Seiki S   Yokoyama Shigeyuki S   Sampei Gen Ichi GI   Kawai Gota G  

Acta crystallographica. Section F, Structural biology communications 20160727 Pt 8


The crystal structures of a subunit of the formylglycinamide ribonucleotide amidotransferase, PurS, from Thermus thermophilus, Sulfolobus tokodaii and Methanocaldococcus jannaschii were determined and their structural characteristics were analyzed. For PurS from T. thermophilus, two structures were determined using two crystals that were grown in different conditions. The four structures in the dimeric form were almost identical to one another despite their relatively low sequence identities. Th  ...[more]

Similar Datasets

| S-EPMC3253826 | biostudies-literature
| S-EPMC2646663 | biostudies-literature
| S-EPMC2926615 | biostudies-literature
| S-EPMC2527724 | biostudies-literature
| S-EPMC2597449 | biostudies-literature
| S-EPMC4135672 | biostudies-literature
| PRJNA35099 | ENA
| PRJNA94529 | ENA
| PRJNA95331 | ENA
| S-EPMC2802868 | biostudies-literature