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An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1(T).


ABSTRACT: Despite their ubiquity and their involvement in food spoilage, the genus Carnobacterium remains rather sparsely characterized at the genome level. Carnobacterium inhibens K1(T) is a member of the Carnobacteriaceae family within the class Bacilli. This strain is a Gram-positive, rod-shaped bacterium isolated from the intestine of an Atlantic salmon. The present study determined the genome sequence and annotation of Carnobacterium inhibens K1(T). The genome comprised 2,748,608 bp with a G?+?C content of 34.85 %, which included 2621 protein-coding genes and 116 RNA genes. The strain contained five contigs corresponding to presumptive plasmids of sizes: 19,036; 24,250; 26,581; 65,272; and 65,904 bp.

SUBMITTER: Nicholson WL 

PROVIDER: S-EPMC5016993 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

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An improved high-quality draft genome sequence of Carnobacterium inhibens subsp. inhibens strain K1(T).

Nicholson Wayne L WL   Davis Christina L CL   Shapiro Nicole N   Huntemann Marcel M   Clum Alicia A   Reddy T B K TB   Pillay Manoj M   Markowitz Victor V   Varghese Neha N   Pati Amrita A   Ivanova Natalia N   Kyrpides Nikos N   Woyke Tanja T  

Standards in genomic sciences 20160908 1


Despite their ubiquity and their involvement in food spoilage, the genus Carnobacterium remains rather sparsely characterized at the genome level. Carnobacterium inhibens K1(T) is a member of the Carnobacteriaceae family within the class Bacilli. This strain is a Gram-positive, rod-shaped bacterium isolated from the intestine of an Atlantic salmon. The present study determined the genome sequence and annotation of Carnobacterium inhibens K1(T). The genome comprised 2,748,608 bp with a G + C cont  ...[more]

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