PyGeno: A Python package for precision medicine and proteogenomics.
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ABSTRACT:
SUBMITTER: Daouda T
PROVIDER: S-EPMC5022704 | biostudies-literature | 2016
REPOSITORIES: biostudies-literature
Publications
pyGeno: A Python package for precision medicine and proteogenomics.
Daouda Tariq T Perreault Claude C Lemieux Sébastien S
F1000Research 20160321
pyGeno is a Python package mainly intended for precision medicine applications that revolve around genomics and proteomics. It integrates reference sequences and annotations from Ensembl, genomic polymorphisms from the dbSNP database and data from next-gen sequencing into an easy to use, memory-efficient and fast framework, therefore allowing the user to easily explore subject-specific genomes and proteomes. Compared to a standalone program, pyGeno gives the user access to the complete expressiv ...[more]
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