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Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area.

ABSTRACT: This study examined physiochemical conditions and prokaryotic community structure (the bacterial and archaeal 16S rRNA genes and mcrA gene abundances and proportions), and evaluated the effect of reed canary grass cultivation and mineral fertilisation on these factors, in the 60 cm thick residual peat layer of experimental plots located on an abandoned peat extraction area. The archaeal proportion was 0.67-39.56% in the prokaryotic community and the methanogens proportion was 0.01-1.77% in the archaeal community. When bacterial abundance was higher in the top 20 cm of peat, the archaea were more abundant in the 20-60 cm layer and methanogens in the 40-60 cm layer of the residual peat. The bacterial abundance was significantly increased, but archaeal abundance was not affected by cultivation. The fertiliser application had a slight effect on peat properties and on archaeal and methanogen abundances in the deeper layer of cultivated peat. The CH4 emission was positively related to mcrA abundance in the 20-60 cm of the bare peat, while in case of reed canary grass cultivation these two parameters were not correlated. Reed canary grass cultivation mitigated CH4 emission, although methanogen abundance remained approximately the same or even increased in different layers of residual peat under cultivated sites over time. This study supports the outlook of using abandoned peat extraction areas to produce reed canary grass for energy purposes as an advisable land-use practice from the perspective of atmospheric impact in peatland-rich Northern Europe.

SUBMITTER: Espenberg M

PROVIDER: S-EPMC5042519 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

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Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area.

Espenberg Mikk M Truu Marika M Truu Jaak J Maddison Martin M Nõlvak Hiie H Järveoja Järvi J Mander Ülo Ü

PloS one 20160929 9

This study examined physiochemical conditions and prokaryotic community structure (the bacterial and archaeal 16S rRNA genes and mcrA gene abundances and proportions), and evaluated the effect of reed canary grass cultivation and mineral fertilisation on these factors, in the 60 cm thick residual peat layer of experimental plots located on an abandoned peat extraction area. The archaeal proportion was 0.67-39.56% in the prokaryotic community and the methanogens proportion was 0.01-1.77% in the a ...[more]

PMID: 27684377

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Project description:A four-year research study was conducted on aquatic plants (reed canary grass) growing in the beds of three rivers and their tributaries in Lower Silesia, Poland. Metal contents (Cu, Cd, Ni, Pb, Zn, Fe, Mn) were determined in plant samples, metal accumulation in water (BCFw) and sediment (BCFB), Metal Pollution Index (MPI) and Enrichment Factor (EF) were calculated. The highest contents of copper, lead, nickel and cadmium were found in reed canary grass sampled from the Nysa Szalona River. The highest values were recorded for zinc in the Bystrzyca River, and for iron and manganese in the Strzegomka River. The series of metals were as follows: Nysa Szalona and Strzegomka: Cd < Ni < Pb < Cu < Zn < Mn < Fe, Bystrzyca: Cd < Ni < Cu < Pb < Zn < Mn < Fe. Throughout the study period, the lowest values of metals in plants were recorded in 2015 and 2018, and the highest in 2017. The general picture of MPI in aquatic plants is arranged in the series Bystrzyca < Strzegomka < Nysa Szalona. These values classify the studied material at a high level of pollution in all rivers. In the comparison of the two extreme sites, i.e., source-mouth, higher values were found at the mouth of the reservoir, which suggests that metals move with the water current and accumulate more with the direction of the river flow, which is most likely a consequence of the influence of the catchment area as the source of metals. The series of EF enrichment factor values were as follows: Bystrzyca-Ni < Cd < Fe < Cu < Zn < Mn < Pb, Nysa Szalona-Ni < Fe < Zn < Cd < Mn < Cu < Pb, Strzegomka-Ni < Cd < Fe < Zn < Cu < Pb < Mn. For all the samples studied, the values found in spring were much higher than in autumn, which indicates the great importance for research in that area. The levels of copper and iron were within the range of moderate values, lead and manganese reached very high and exceptionally high values, and the remaining metals were within the values described as significant. Bioaccumulation of metals determined relative to bottom sediments was highest in 2017 and lowest in 2018, while bioaccumulation relative to water was highest in 2018 and lowest in 2016. The four-year study found that the metal content in reed canary grass was mostly within the range of mean values presented in the literature from moderately polluted areas. Also, no significant deviation was found from levels that have been recorded for the same rivers for more than two decades.

Project description:Ombrotrophic peatlands are a recognized global carbon reservoir. Without restoration and peat regrowth, harvested peatlands are dramatically altered, impairing their carbon sink function, with consequences for methane turnover. Previous studies determined the impact of commercial mining on the physicochemical properties of peat and the effects on methane turnover. However, the response of the underlying microbial communities catalyzing methane production and oxidation have so far received little attention. We hypothesize that with the return of Sphagnum spp. postharvest, methane turnover potential and the corresponding microbial communities will converge in a natural and restored peatland. To address our hypothesis, we determined the potential methane production and oxidation rates in natural (as a reference), actively mined, abandoned, and restored peatlands over two consecutive years. In all sites, the methanogenic and methanotrophic population sizes were enumerated using quantitative PCR (qPCR) assays targeting the mcrA and pmoA genes, respectively. Shifts in the community composition were determined using Illumina MiSeq sequencing of the mcrA gene and a pmoA-based terminal restriction fragment length polymorphism (t-RFLP) analysis, complemented by cloning and sequence analysis of the mmoX gene. Peat mining adversely affected methane turnover potential, but the rates recovered in the restored site. The recovery in potential activity was reflected in the methanogenic and methanotrophic abundances. However, the microbial community composition was altered, being more pronounced for the methanotrophs. Overall, we observed a lag between the recovery of the methanogenic/methanotrophic activity and the return of the corresponding microbial communities, suggesting that a longer duration (>15 years) is needed to reverse mining-induced effects on the methane-cycling microbial communities.IMPORTANCE Ombrotrophic peatlands are a crucial carbon sink, but this environment is also a source of methane, an important greenhouse gas. Methane emission in peatlands is regulated by methane production and oxidation catalyzed by methanogens and methanotrophs, respectively. Methane-cycling microbial communities have been documented in natural peatlands. However, less is known of their response to peat mining and of the recovery of the community after restoration. Mining exerts an adverse impact on potential methane production and oxidation rates and on methanogenic and methanotrophic population abundances. Peat mining also induced a shift in the methane-cycling microbial community composition. Nevertheless, with the return of Sphagnum spp. in the restored site after 15 years, methanogenic and methanotrophic activity and population abundance recovered well. The recovery, however, was not fully reflected in the community composition, suggesting that >15 years are needed to reverse mining-induced effects.

Dataset Information

Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area.

Publications

Impact of Reed Canary Grass Cultivation and Mineral Fertilisation on the Microbial Abundance and Genetic Potential for Methane Production in Residual Peat of an Abandoned Peat Extraction Area.

Similar Datasets

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