Unknown

Dataset Information

0

Large-scale microfluidics providing high-resolution and high-throughput screening of Caenorhabditis elegans poly-glutamine aggregation model.


ABSTRACT: Next generation drug screening could benefit greatly from in vivo studies, using small animal models such as Caenorhabditis elegans for hit identification and lead optimization. Current in vivo assays can operate either at low throughput with high resolution or with low resolution at high throughput. To enable both high-throughput and high-resolution imaging of C. elegans, we developed an automated microfluidic platform. This platform can image 15 z-stacks of ?4,000 C. elegans from 96 different populations using a large-scale chip with a micron resolution in 16?min. Using this platform, we screened ?100,000 animals of the poly-glutamine aggregation model on 25 chips. We tested the efficacy of ?1,000 FDA-approved drugs in improving the aggregation phenotype of the model and identified four confirmed hits. This robust platform now enables high-content screening of various C. elegans disease models at the speed and cost of in vitro cell-based assays.

SUBMITTER: Mondal S 

PROVIDER: S-EPMC5062571 | biostudies-literature | 2016 Oct

REPOSITORIES: biostudies-literature

altmetric image

Publications

Large-scale microfluidics providing high-resolution and high-throughput screening of Caenorhabditis elegans poly-glutamine aggregation model.

Mondal Sudip S   Hegarty Evan E   Martin Chris C   Gökçe Sertan Kutal SK   Ghorashian Navid N   Ben-Yakar Adela A  

Nature communications 20161011


Next generation drug screening could benefit greatly from in vivo studies, using small animal models such as Caenorhabditis elegans for hit identification and lead optimization. Current in vivo assays can operate either at low throughput with high resolution or with low resolution at high throughput. To enable both high-throughput and high-resolution imaging of C. elegans, we developed an automated microfluidic platform. This platform can image 15 z-stacks of ∼4,000 C. elegans from 96 different  ...[more]

Similar Datasets

| S-EPMC186621 | biostudies-literature
| S-EPMC310813 | biostudies-literature
| S-EPMC4640506 | biostudies-literature
| S-EPMC3831453 | biostudies-literature
| S-EPMC5263027 | biostudies-literature
| S-EPMC2732576 | biostudies-literature
2023-05-30 | PXD027733 | Pride
2008-06-16 | GSE11738 | GEO
2016-02-18 | GSE60755 | GEO
2016-02-18 | E-GEOD-60755 | biostudies-arrayexpress