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Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets.


ABSTRACT: Escherichia coli F18 is mainly responsible for post-weaning diarrhea (PWD) in piglets. The molecular regulation of E. coli F18 resistance in Chinese domestic weaned piglets is still obscure. We used Meishan piglets as model animals to test their susceptibility to E. coli F18. Small RNA duodenal libraries were constructed for E. coli F18-sensitive and -resistant weaned piglets challenged with E. coli F18 and sequenced using Illumina Solexa high-throughput sequencing technology.Sequencing results showed that 3,475,231 and 37,198,259 clean reads were obtained, with 311 known miRNAs differently expressed in resistant and sensitive groups, respectively. Twenty-four miRNAs, including 15 up-regulated and 9 down-regulated, demonstrated more than a 2-fold differential expression between the F18-resistant and -sensitive piglets. Stem-loop RT-qPCR showed that miR-136, miR-196b, miR-499-5p and miR-218-3p significantly expressed in intestinal tissue (p?

SUBMITTER: Wu Z 

PROVIDER: S-EPMC5093996 | biostudies-literature | 2016 Nov

REPOSITORIES: biostudies-literature

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Identification of microRNAs regulating Escherichia coli F18 infection in Meishan weaned piglets.

Wu Zhengchang Z   Qin Weiyun W   Wu Seng S   Zhu Guoqiang G   Bao Wenbin W   Wu Shenglong S  

Biology direct 20161103 1


<h4>Background</h4>Escherichia coli F18 is mainly responsible for post-weaning diarrhea (PWD) in piglets. The molecular regulation of E. coli F18 resistance in Chinese domestic weaned piglets is still obscure. We used Meishan piglets as model animals to test their susceptibility to E. coli F18. Small RNA duodenal libraries were constructed for E. coli F18-sensitive and -resistant weaned piglets challenged with E. coli F18 and sequenced using Illumina Solexa high-throughput sequencing technology.  ...[more]

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