Dataset Information

Yangtze River, an insignificant genetic boundary in tufted deer (Elaphodus cephalophus): the evidence from a first population genetics study.

ABSTRACT: Great rivers were generally looked at as the geographical barrier to gene flow for many taxonomic groups. The Yangtze River is the third largest river in the world, and flows across South China and into the East China Sea. Up until now, few studies have been carried out to evaluate its effect as a geographical barrier. In this study, we attempted to determine the barrier effect of the Yangtze River on the tufted deer (Elaphodus cephalophus) using the molecular ecology approach. Using mitochondrial DNA control region (CR) sequences and 13 nuclear microsatellite loci, we explored the genetic structure and gene flow in two adjacent tufted deer populations (Dabashan and Wulingshan populations), which are separated by the Yangtze River. Results indicated that there are high genetic diversity levels in the two populations, but no distinguishable haplotype group or potential genetic cluster was detected which corresponded to specific geographical population. At the same time, high gene flow was observed between Wulingshan and Dabashan populations. The tufted deer populations experienced population decrease from 0.3 to 0.09 Ma BP, then followed by a distinct population increase. A strong signal of recent population decline (T = 4,396 years) was detected in the Wulingshan population by a Markov-Switching Vector Autoregressions(MSVAR) process population demography analysis. The results indicated that the Yangtze River may not act as an effective barrier to gene flow in the tufted deer. Finally, we surmised that the population demography of the tufted deer was likely affected by Pleistocene climate fluctuations and ancient human activities.

SUBMITTER: Sun Z

PROVIDER: S-EPMC5103815 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

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Yangtze River, an insignificant genetic boundary in tufted deer (<i>Elaphodus cephalophus</i>): the evidence from a first population genetics study.

Sun Zhonglou Z Pan Tao T Wang Hui H Pang Mujia M Zhang Baowei B

PeerJ 20161108

Great rivers were generally looked at as the geographical barrier to gene flow for many taxonomic groups. The Yangtze River is the third largest river in the world, and flows across South China and into the East China Sea. Up until now, few studies have been carried out to evaluate its effect as a geographical barrier. In this study, we attempted to determine the barrier effect of the Yangtze River on the tufted deer (<i>Elaphodus cephalophus</i>) using the molecular ecology approach. Using mito ...[more]

PMID: 27843712

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Project description:BackgroundThe spatiotemporal variation of observed trace gases (NO2, SO2, O3) and particulate matter (PM2.5, PM10) were investigated over cities of Yangtze River Delta (YRD) region including Nanjing, Hefei, Shanghai and Hangzhou. Furthermore, the characteristics of different pollution episodes, i.e., haze events (visibility < 7 km, relative humidity < 80%, and PM2.5 > 40 µg/m3) and complex pollution episodes (PM2.5 > 35 µg/m3 and O3 > 160 µg/m3) were studied over the cities of the YRD region. The impact of China clean air action plan on concentration of aerosols and trace gases is examined. The impacts of trans-boundary pollution and different meteorological conditions were also examined.ResultsThe highest annual mean concentrations of PM2.5, PM10, NO2 and O3 were found for 2019 over all the cities. The annual mean concentrations of PM2.5, PM10, and NO2 showed continuous declines from 2019 to 2021 due to emission control measures and implementation of the Clean Air Action plan over all the cities of the YRD region. The annual mean O3 levels showed a decline in 2020 over all the cities of YRD region, which is unprecedented since the beginning of the China's National environmental monitoring program since 2013. However, a slight increase in annual O3 was observed in 2021. The highest overall means of PM2.5, PM10, SO2, and NO2 were observed over Hefei, whereas the highest O3 levels were found in Nanjing. Despite the strict control measures, PM2.5 and PM10 concentrations exceeded the Grade-1 National Ambient Air Quality Standards (NAAQS) and WHO (World Health Organization) guidelines over all the cities of the YRD region. The number of haze days was higher in Hefei and Nanjing, whereas the complex pollution episodes or concurrent occurrence of O3 and PM2.5 pollution days were higher in Hangzhou and Shanghai.The in situ data for SO2 and NO2 showed strong correlation with Tropospheric Monitoring Instrument (TROPOMI) satellite data.ConclusionsDespite the observed reductions in primary pollutants concentrations, the secondary pollutants formation is still a concern for major metropolises. The increase in temperature and lower relative humidity favors the accumulation of O3, while low temperature, low wind speeds and lower relative humidity favor the accumulation of primary pollutants. This study depicts different air pollution problems for different cities inside a region. Therefore, there is a dire need to continuous monitoring and analysis of air quality parameters and design city-specific policies and action plans to effectively deal with the metropolitan pollution.Supplementary informationThe online version contains supplementary material available at 10.1186/s12302-022-00668-2.

Dataset Information

Yangtze River, an insignificant genetic boundary in tufted deer (Elaphodus cephalophus): the evidence from a first population genetics study.

Publications

Yangtze River, an insignificant genetic boundary in tufted deer (<i>Elaphodus cephalophus</i>): the evidence from a first population genetics study.

Similar Datasets

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