Unknown

Dataset Information

0

Follicular fluid biomarkers for human in vitro fertilization outcome: Proof of principle.


ABSTRACT: BACKGROUND:Human follicular fluid (FF) is a unique biological fluid in which the oocyte develops in vivo, and presents an optimal source for non-invasive biochemical predictors. Oocyte quality directly influences the embryo development and hence, may be used as a predictor of embryo quality. Peptide profiling of FF and its potential use as a biomarker for oocyte quality has never been reported. METHODS:This study screened FF for peptide biomarkers that predict the outcome of in vitro fertilization (IVF). Potential biomarkers were discovered by investigating 2 training datasets, consisting both of 17 samples and validating on an independent experiment containing 32 samples. Peptide profiles were acquired by nano-scale liquid chromatography coupled to tandem mass spectrometry (nano LC-MS/MS). RESULTS:From the training datasets 53 peptides were found as potential biomarker candidates, predicting the fertilization outcome of 24 out of the 32 validation samples blindly (81.3% sensitivity, 68.8% specificity, AUC?=?0.86). Seven potential biomarker peptides were identified. They were derived from: insulin-like growth factor binding protein-5, alpha-2-antiplasmin, complement component 3, inter-alpha-trypsin inhibitor heavy chain H1, serum albumin, protein diaphanous homolog 1 and plastin-3. CONCLUSIONS:The MS-based comprehensive peptidomic approach carried out in this study, established a novel panel of potential biomarkers that present a promising predictive accuracy rate in fertilization outcome, and indicates FF as an interesting biomarker resource to improve IVF clinic routine.

SUBMITTER: Chen F 

PROVIDER: S-EPMC5109724 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature

altmetric image

Publications

Follicular fluid biomarkers for human in vitro fertilization outcome: Proof of principle.

Chen Fang F   Spiessens Carl C   D'Hooghe Thomas T   Peeraer Karen K   Carpentier Sebastien S  

Proteome science 20161114


<h4>Background</h4>Human follicular fluid (FF) is a unique biological fluid in which the oocyte develops in vivo, and presents an optimal source for non-invasive biochemical predictors. Oocyte quality directly influences the embryo development and hence, may be used as a predictor of embryo quality. Peptide profiling of FF and its potential use as a biomarker for oocyte quality has never been reported.<h4>Methods</h4>This study screened FF for peptide biomarkers that predict the outcome of in vi  ...[more]

Similar Datasets

| S-EPMC5530927 | biostudies-literature
| S-EPMC8395780 | biostudies-literature
| S-EPMC4840336 | biostudies-literature
| S-EPMC2582091 | biostudies-other
2018-07-05 | PXD005436 | Pride
| S-EPMC6459300 | biostudies-literature
| S-EPMC7870083 | biostudies-literature
| S-EPMC5545221 | biostudies-literature
| S-EPMC6063829 | biostudies-literature
| S-EPMC5237431 | biostudies-literature