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Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016.

ABSTRACT: Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016.

SUBMITTER: Huang W 

PROVIDER: S-EPMC5159578 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Complete Genome Sequences of Nine Enterovirus D68 Strains from Patients of the Lower Hudson Valley, New York, 2016.

Huang Weihua W   Yin Changhong C   Zhuge Jian J   Farooq Taliya T   Yoon Esther C EC   Nolan Sheila M SM   Chen Donald D   Fallon John T JT   Wang Guiqing G  

Genome announcements 20161215 6

Complete genome sequences of nine enterovirus D68 (EV-D68) strains from patients in New York were obtained in 2016 by metagenomic next-generation sequencing. Comparative genomic analysis suggests that a new subclade B3, with ~4.5% nucleotide divergence from subclade B1 strains causing the 2014 outbreak, is circulating in the United States in 2016. ...[more]

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