Dataset Information

Rapid dissemination of taxonomic discoveries based on DNA barcoding and morphology.

ABSTRACT: The taxonomic impediment is characterized by dwindling classical taxonomic expertise, and slow pace of revisionary work, thus more rapid taxonomic assessments are needed. Here we pair rapid DNA barcoding methods with swift assessment of morphology in an effort to gauge diversity, establish species limits, and rapidly disseminate taxonomic information prior to completion of formal taxonomic revisions. We focus on a poorly studied, but diverse spider genus, Pseudopoda, from East Asia. We augmented the standard barcoding locus (COI) with nuclear DNA sequence data (ITS2) and analyzed congruence among datasets and species delimitation methods for a total of 572 individuals representing 23 described species and many potentially new species. Our results suggest that a combination of CO1?+?ITS2 fragments identify and diagnose species better than the mitochondrial barcodes alone, and that certain tree based methods yield considerably higher diversity estimates than the distance-based approaches and morphology. Combined, through an extensive field survey, we detect a twofold increase in species diversity in the surveyed area, at 42-45, with most species representing short range endemics. Our study demonstrates the power of biodiversity assessments and swift dissemination of taxonomic data through rapid inventory, and through a combination of morphological and multi-locus DNA barcoding diagnoses of diverse arthropod lineages.

SUBMITTER: Cao X

PROVIDER: S-EPMC5171852 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Rapid dissemination of taxonomic discoveries based on DNA barcoding and morphology.

Cao Xiaowei X Liu Jie J Chen Jian J Zheng Guo G Kuntner Matjaž M Agnarsson Ingi I

Scientific reports 20161219

The taxonomic impediment is characterized by dwindling classical taxonomic expertise, and slow pace of revisionary work, thus more rapid taxonomic assessments are needed. Here we pair rapid DNA barcoding methods with swift assessment of morphology in an effort to gauge diversity, establish species limits, and rapidly disseminate taxonomic information prior to completion of formal taxonomic revisions. We focus on a poorly studied, but diverse spider genus, Pseudopoda, from East Asia. We augmented ...[more]

PMID: 27991489

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Rapid dissemination of taxonomic discoveries based on DNA barcoding and morphology.

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Rapid dissemination of taxonomic discoveries based on DNA barcoding and morphology.

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