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A comprehensive software suite for the analysis of cDNAs.


ABSTRACT: We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction.

SUBMITTER: Arakawa K 

PROVIDER: S-EPMC5172547 | biostudies-literature | 2005 Aug

REPOSITORIES: biostudies-literature

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A comprehensive software suite for the analysis of cDNAs.

Arakawa Kazuharu K   Suzuki Haruo H   Fujishima Kosuke K   Fujimoto Kenji K   Ueda Sho S   Matsui Motomu M   Tomita Masaru M  

Genomics, proteomics & bioinformatics 20050801 3


We have developed a comprehensive software suite for bioinformatics research of cDNAs; it is aimed at rapid characterization of the features of genes and the proteins they code. Methods implemented include the detection of translation initiation and termination signals, statistical analysis of codon usage, comparative study of amino acid composition, comparative modeling of the structures of product proteins, prediction of alternative splice forms, and metabolic pathway reconstruction. ...[more]

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