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Amoebic liver abscess in northern Sri Lanka: first report of immunological and molecular confirmation of aetiology.

ABSTRACT: BACKGROUND:Since 1985, amoebic liver abscess (ALA) has been a public health problem in northern Sri Lanka. Clinicians arrive at a diagnosis based on clinical and ultrasonographic findings, which cannot differentiate pyogenic liver abscess (PLA) from ALA. As the treatment and outcome of the ALA and PLA differs, determining the etiological agent is crucial. METHODS:All clinically diagnosed ALA patients admitted to the Teaching Hospital (TH) in Jaffna during the study period were included and the clinical features, haematological parameters, and ultrasound scanning findings were obtained. Aspirated pus, blood, and faecal samples from patients were also collected. Pus and faeces were examined microscopically for amoebae. Pus was cultured in Robinson's medium for amoebae, and MacConkey and blood agar for bacterial growth. ELISA kits were used for immunodiagnosis of Entamoeba histolytica infection. DNA was extracted from selected pus samples and amplified using nested PCR and the purified product was sequenced. RESULTS:From July 2012 to July 2015, 346 of 367 clinically diagnosed ALA patients admitted to Jaffna Teaching Hospital were enrolled in this study. Almost all patients (98.6%) were males with a history of heavy alcohol consumption (100%). The main clinical features were fever (100%), right hypochodric pain (100%), tender hepatomegaly (90%) and intercostal tenderness (60%). Most patients had leukocytosis (86.7%), elevated ESR (85.8%) and elevated alkaline phosphatase (72.3%). Most of the abscesses were in the right lobe (85.3%) and solitary (76.3%) in nature. Among the 221 (63.87%) drained abscesses, 93.2% were chocolate brown in colour with the mean volume of 41.22?±?1.16 ml. Only four pus samples (2%) were positive for amoeba by culture and the rest of the pus and faecal samples were negative microscopically and by culture. Furthermore, all pus samples were negative for bacterial growth. Antibody against E. histolytica (99.7%) and the E. histolytica antigen were detected in the pus samples (100%). Moreover, PCR and sequencing confirmed these results. CONCLUSION:To our knowledge, this is the first report from Sri Lanka that provides immunological and molecular confirmation that Entamoeba histolytica is a common cause of liver abscesses in the region.

SUBMITTER: Kannathasan S

PROVIDER: S-EPMC5219765 | biostudies-literature | 2017 Jan

REPOSITORIES: biostudies-literature

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Amoebic liver abscess in northern Sri Lanka: first report of immunological and molecular confirmation of aetiology.

Kannathasan Selvam S Murugananthan Arumugam A Kumanan Thirunavukarasu T Iddawala Devika D de Silva Nilanthi Renuka NR Rajeshkannan Nadarajah N Haque Rashidul R

Parasites & vectors 20170107 1

<h4>Background</h4>Since 1985, amoebic liver abscess (ALA) has been a public health problem in northern Sri Lanka. Clinicians arrive at a diagnosis based on clinical and ultrasonographic findings, which cannot differentiate pyogenic liver abscess (PLA) from ALA. As the treatment and outcome of the ALA and PLA differs, determining the etiological agent is crucial.<h4>Methods</h4>All clinically diagnosed ALA patients admitted to the Teaching Hospital (TH) in Jaffna during the study period were inc ...[more]

PMID: 28061872

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Project description:BackgroundInfection with Entamoeba histolytica and associated complications are relatively rare in developed countries. The overall low prevalence in the Western world as well as the possibly prolonged latency period between infection with the causing pathogen and onset of clinical symptoms may delay diagnosis of and adequate treatment for amoebiasis. Amoebic liver abscess (ALA) is the most common extraintestinal manifestation of invasive amoebiasis. Pregnancy has been described as a risk factor for development of invasive amoebiasis and management of these patients is especially complex.Case presentationA 30-year-old Caucasian woman in early pregnancy presented to our emergency department with abdominal pain alongside elevated inflammatory markers and liver function tests. Travel history revealed multiple journeys to tropic and subtropic regions during the past decade and a prolonged episode of intermittently bloody diarrhea during a five month stay in Indonesia seven years prior to admission. Sonographic and magnetic resonance imaging revealed a 5?×?4 cm hepatic abscess. After ultrasound-guided transcutaneous liver drainage, both abscess fluids and blood cultures showed neither bacterial growth nor microscopic signs of parasitic disease. Serological testing confirmed an infection with Entamoeba histolytica, which was treated with metronidazole, followed by eradication therapy with paromomycin. Subsequent clinical, laboratory and imaging follow-up exams showed regression of the ALA. In addition, the pregnancy completed without complications and a healthy baby boy was born 7 months after termination of treatment.ConclusionsThis case of invasive amoebiasis in early pregnancy outside of endemic regions and several years after exposure demonstrates the importance of broad differential diagnostics in the context of liver abscesses. The complex interdisciplinary decisions regarding the choice of imaging techniques as well as interventional and antibiotic therapy in the context of pregnancy are discussed. Furthermore, we present possible explanations for pregnancy as a risk factor for an invasive course of amoebiasis.

Project description:BackgroundNutritional status is an important indicator for measuring quality of life in children. A region that is recovering from war will face many problems related to nutrition. Very few studies have addressed the nutritional problems in school children. This study was undertaken to identify the prevalence of wasting, stunting and obesity among school children from Northern Sri Lanka and associated socio-demographic factors.MethodsA community based cross-sectional study was carried out using multistage stratified proportionate cluster among healthy children attending schools in the Northern part of the country. Height and weight were measured, and Body Mass Index (BMI) calculated [weight (kg)/Height (m) 2]. BMI-for-age z-score (BAZ) and Height for age Z (HAZ) scores were determined and WHO growth references were used to categorise the nutritional status. Correlation between various nutritional problems with Maternal education, household income, number of family members and the residential area was assessed.ResultsA total of 1012 children were recruited, and the mean age and standard deviation were 11.12±1.77 yrs. Girls in the age ranges of 9-14 were heavier and taller when compared to the boys compatible with the pubertal growth spurt. Stunting based on the height for age was seen in 10.9% of boys and 11.8% of girls. Wasting based on BMI for age WHO standard (WHO 2007) was seen in 30.6% of boys and 29.1% of the girls. The prevalence of overweight was 11% and Obesity was 6.3% of the population. Obesity was predominantly seen in boys (4.2%) and it was significantly higher when compared to the girls (2.1%) (p < 0.001). Obesity in older boys (> 10 years) was significantly more than the younger ones (p < 0.01). Maternal education and family income had a significant impact on the prevalence of wasting, stunting and obesity whereas the family size contributed to the wasting and obesity (p< 0.001).ConclusionFindings suggest that stunting, wasting, overweight and obesity are prevalent among 6-16-year-old leading to concerns in public health. The nutritional status significantly varies according to the geographical location, maternal education and the household income.

Project description:Soil data for Sri Lanka are available through semi-detailed series maps that were developed based on limited soil profile data combined with expert knowledge. This data plays a vital role in decisions at national and regional levels. However, the present format of this database does not allow for their wider use in crop simulation modelling and other related agricultural research that require finer scale data. This is due to the fact that cross-country profile data are not harmonised based on standard depths. Several attempts were made to produce digital soil data for Sri Lanka at different geographic scales, however, a completely harmonised data that covers variability across depths and properties is yet to be made available. In this article, we describe the first version of the open digital soil database that was developed using a database of 122 locations across the country. Soil properties were harmonised for standard depths using equal-area quadratic smoothing splines. Out of several interpolation methods that were evaluated for univariate interpolation, maps which were produced with the least overall error (RMSE) in the process of cross-validation were selected. The newly developed digital soil database contains 9 soil properties; pH, bulk density, cation exchange capacity, organic carbon, volumetric moisture content at 0.33 and 15 bars levels, sand silt and clay content. Moreover, the data are available for five standard depth layers as 0-5, 5-15, 15-30, 30-60 and 60-100 cm in raster format at 1 km spatial resolution. Both interpolated property maps and their error maps were stored in an open repository and made available for public use. The first version of all maps is also showcased online through open web mapping services. The repository will be gradually updated with higher resolution and more accurate maps as more samples become available and better interpolation method are used. This data could provide complementary information for insight generation at finer scales where limited local informaiton about soils hinders agricultural development.

Dataset Information

Amoebic liver abscess in northern Sri Lanka: first report of immunological and molecular confirmation of aetiology.

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Amoebic liver abscess in northern Sri Lanka: first report of immunological and molecular confirmation of aetiology.

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