Dataset Information

Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers.

ABSTRACT: The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas-Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)-was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accessions were classified into two cluster groups I and II, which corresponded to Indica Group and Japonica Group, respectively. Cluster group I accessions were distributed mainly in upland ecosystems; group II were distributed in lowland in the Southern area, and the distributions of dominant groups differed among areas. Rice germplasm in Myanmar has maintained high genetic diversity among ecosystems and areas. This information will be used for advanced studies in germplasm and rice breeding in Myanmar.

SUBMITTER: Wunna

PROVIDER: S-EPMC5282748 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Genetic variation of rice (<i>Oryza sativa</i> L.) germplasm in Myanmar based on genomic compositions of DNA markers.

Wunna Watanabe Kazuo N KN Ohsawa Ryo R Obara Mitsuhiro M Yanagihara Seiji S Aung Pa Pa PP Fukuta Yoshimichi Y

Breeding science 20161117 5

The genetic diversity of 175 rice accessions from Myanmar, including landraces and improved types from upland and lowland ecosystems in five different areas-Western (hilly), Northern (mountainous), North and South-eastern (plateau), and Southern (plain)-was evaluated on the basis of polymorphism data for 65 DNA markers and phenol reactions. On the basis of the DNA polymorphism data, high genetic diversity was confirmed to conserve in the accessions from each ecosystem and area. And the accession ...[more]

PMID: 28163592

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Project description:The genetic diversity of rice germplasm is the basis for increases in rice yield and quality. The collection, assessment, and protection of the genetic diversity of rice germplasm is important for achieving sustainable agriculture and assuring food security. Many underdeveloped indigenous areas have abundant and valuable rice germplasm resources. However, in-depth assessments of the genetic diversity of rice germplasm from these areas and studies related to protecting these traditional cultures are not available. In this study, from 2005 to 2016, the authors have conducted in-depth evaluation of the genetic diversity of Kam fragrant glutinous rice germplasm resources in southeast Guizhou by using multidisciplinary comprehensive methods such as ethnobotany, cultural anthropology, and modern molecular markers. In total, 376 Kam fragrant glutinous rice samples from 42 villages in the Dong community in southeast Guizhou were collected. Agronomic traits of panicles were complex and exhibited diversity. Some varieties had good disease resistance and adaptation to cold and wet climates. The Dong people named the Kam fragrant glutinous rice varieties by using seven elements, including diverse traits, growth environment, and origin. Traditional folk classification, in addition to morphology and biological analysis using molecular markers, indicates that Kam fragrant glutinous rice includes 91 varieties. Kam fragrant glutinous rice comprises a very high number of varieties, most of which are japonica-type and exhibit a high level of genetic diversity. The traditional folk classification of Kam fragrant glutinous rice by the Dong community is consistent with the biological classification. The traditional naming of Kam fragrant glutinous rice provides an important reference for understanding its genetic diversity. The high level of genetic diversity in Kam fragrant glutinous rice is not only related to the natural environment of the area but also tightly linked with the abundant and diverse Dong ethnic traditional cultures, which has led to protection of Kam fragrant glutinous rice's genetic diversity.

Dataset Information

Genetic variation of rice (Oryza sativa L.) germplasm in Myanmar based on genomic compositions of DNA markers.

Publications

Genetic variation of rice (<i>Oryza sativa</i> L.) germplasm in Myanmar based on genomic compositions of DNA markers.

Similar Datasets

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