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Tumor LINE-1 Methylation Level in Association with Survival of Patients with Stage II Colon Cancer.


ABSTRACT: Genome-wide DNA hypomethylation is associated with a worse prognosis in early-stage colorectal cancer. To measure genome-wide DNA methylation levels, long interspersed nucleotide element (LINE-1) repeats are used as a surrogate marker. Cohort studies on the clinical impact of genome-wide DNA methylation level in patients with only early-stage colon cancer, are currently lacking. This study aimed to investigate the prognostic value of LINE-1 methylation in a stage II colon cancer cohort (n = 164). Manual needle microdissection of tumor areas was performed on formalin-fixed paraffin-embedded tumor tissue sections followed by DNA extraction. Bisulfite converted DNA was used to assess tumor LINE-1 methylation level by qPCR. Patients with LINE-1 hypomethylated tumors had a significantly worse overall survival compared to patients with a higher level of LINE-1 tumor DNA methylation (HR 1.68, 95% CI 1.03-2.75; p = 0.04). This effect was more prominent in patients aged over 65 years (HR 2.00, 95% CI 1.13-3.52; p = 0.02), although the test for age interaction was not significant. No significant effect on recurrence-free survival was observed. Based on these results, tumor LINE-1 hypomethylation is associated with a worse overall survival in stage II colon cancer. Whether the origin of this causation is cancer-specific or age-related can be debated.

SUBMITTER: Swets M 

PROVIDER: S-EPMC5297671 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Tumor LINE-1 Methylation Level in Association with Survival of Patients with Stage II Colon Cancer.

Swets Marloes M   Zaalberg Anniek A   Boot Arnoud A   van Wezel Tom T   Frouws Martine A MA   Bastiaannet Esther E   Gelderblom Hans H   van de Velde Cornelis J H CJ   Kuppen Peter J K PJ  

International journal of molecular sciences 20161227 1


Genome-wide DNA hypomethylation is associated with a worse prognosis in early-stage colorectal cancer. To measure genome-wide DNA methylation levels, long interspersed nucleotide element (LINE-1) repeats are used as a surrogate marker. Cohort studies on the clinical impact of genome-wide DNA methylation level in patients with only early-stage colon cancer, are currently lacking. This study aimed to investigate the prognostic value of LINE-1 methylation in a stage II colon cancer cohort (<i>n</i>  ...[more]

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