Unknown

Dataset Information

0

Transcriptional Networks Controlled by NKX2-1 in the Development of Forebrain GABAergic Neurons.


ABSTRACT: The embryonic basal ganglia generates multiple projection neurons and interneuron subtypes from distinct progenitor domains. Combinatorial interactions of transcription factors and chromatin are thought to regulate gene expression. In the medial ganglionic eminence, the NKX2-1 transcription factor controls regional identity and, with LHX6, is necessary to specify pallidal projection neurons and forebrain interneurons. Here, we dissected the molecular functions of NKX2-1 by defining its chromosomal binding, regulation of gene expression, and epigenetic state. NKX2-1 binding at distal regulatory elements led to a repressed epigenetic state and transcriptional repression in the ventricular zone. Conversely, NKX2-1 is required to establish a permissive chromatin state and transcriptional activation in the sub-ventricular and mantle zones. Moreover, combinatorial binding of NKX2-1 and LHX6 promotes transcriptionally permissive chromatin and activates genes expressed in cortical migrating interneurons. Our integrated approach provides a foundation for elucidating transcriptional networks guiding the development of the MGE and its descendants.

SUBMITTER: Sandberg M 

PROVIDER: S-EPMC5319854 | biostudies-literature | 2016 Sep

REPOSITORIES: biostudies-literature

altmetric image

Publications

Transcriptional Networks Controlled by NKX2-1 in the Development of Forebrain GABAergic Neurons.

Sandberg Magnus M   Flandin Pierre P   Silberberg Shanni S   Su-Feher Linda L   Price James D JD   Hu Jia Sheng JS   Kim Carol C   Visel Axel A   Nord Alex S AS   Rubenstein John L R JLR  

Neuron 20160901 6


The embryonic basal ganglia generates multiple projection neurons and interneuron subtypes from distinct progenitor domains. Combinatorial interactions of transcription factors and chromatin are thought to regulate gene expression. In the medial ganglionic eminence, the NKX2-1 transcription factor controls regional identity and, with LHX6, is necessary to specify pallidal projection neurons and forebrain interneurons. Here, we dissected the molecular functions of NKX2-1 by defining its chromosom  ...[more]

Similar Datasets

2016-09-21 | GSE85705 | GEO
2016-09-21 | GSE85703 | GEO
2016-09-21 | GSE85704 | GEO
| PRJNA339133 | ENA
| S-EPMC6750766 | biostudies-literature
2019-08-20 | GSE124936 | GEO
| S-EPMC4297504 | biostudies-literature
| S-EPMC5932272 | biostudies-literature
| S-EPMC2605417 | biostudies-literature
| S-EPMC4214708 | biostudies-literature