Unknown

Dataset Information

0

Sensing relative signal in the Tgf-?/Smad pathway.


ABSTRACT: How signaling pathways function reliably despite cellular variation remains a question in many systems. In the transforming growth factor-? (Tgf-?) pathway, exposure to ligand stimulates nuclear localization of Smad proteins, which then regulate target gene expression. Examining Smad3 dynamics in live reporter cells, we found evidence for fold-change detection. Although the level of nuclear Smad3 varied across cells, the fold change in the level of nuclear Smad3 was a more precise outcome of ligand stimulation. The precision of the fold-change response was observed throughout the signaling duration and across Tgf-? doses, and significantly increased the information transduction capacity of the pathway. Using single-molecule FISH, we further observed that expression of Smad3 target genes (ctgf, snai1, and wnt9a) correlated more strongly with the fold change, rather than the level, of nuclear Smad3. These findings suggest that some target genes sense Smad3 level relative to background, as a strategy for coping with cellular noise.

SUBMITTER: Frick CL 

PROVIDER: S-EPMC5389321 | biostudies-literature | 2017 Apr

REPOSITORIES: biostudies-literature

altmetric image

Publications

Sensing relative signal in the Tgf-β/Smad pathway.

Frick Christopher L CL   Yarka Clare C   Nunns Harry H   Goentoro Lea L  

Proceedings of the National Academy of Sciences of the United States of America 20170320 14


How signaling pathways function reliably despite cellular variation remains a question in many systems. In the transforming growth factor-β (Tgf-β) pathway, exposure to ligand stimulates nuclear localization of Smad proteins, which then regulate target gene expression. Examining Smad3 dynamics in live reporter cells, we found evidence for fold-change detection. Although the level of nuclear Smad3 varied across cells, the fold change in the level of nuclear Smad3 was a more precise outcome of lig  ...[more]

Similar Datasets

2023-11-20 | GSE122913 | GEO
| S-EPMC316742 | biostudies-literature
| PRJNA506898 | ENA
| S-EPMC7882964 | biostudies-literature
| S-EPMC9395380 | biostudies-literature
| S-EPMC7922480 | biostudies-literature
| S-EPMC4365692 | biostudies-literature
| S-EPMC1978528 | biostudies-literature
| S-EPMC7201932 | biostudies-literature
| S-EPMC10487229 | biostudies-literature