Dataset Information

Mathematical model of TGF-?signalling: feedback coupling is consistent with signal switching.

ABSTRACT:

Background

Transforming growth factor ? (TGF-?) signalling regulates the development of embryos and tissue homeostasis in adults. In conjunction with other oncogenic changes, long-term perturbation of TGF-? signalling is associated with cancer metastasis. Although TGF-? signalling can be complex, many of the signalling components are well defined, so it is possible to develop mathematical models of TGF-? signalling using reduction and scaling methods. The parameterization of our TGF-? signalling model is consistent with experimental data.

Results

We developed our mathematical model for the TGF-? signalling pathway, i.e. the RF- model of TGF-? signalling, using the "rapid equilibrium assumption" to reduce the network of TGF-? signalling reactions based on the time scales of the individual reactions. By adding time-delayed positive feedback to the inherent time-delayed negative feedback for TGF-? signalling. We were able to simulate the sigmoidal, switch-like behaviour observed for the concentration dependence of long-term (> 3 hours) TGF-? stimulation. Computer simulations revealed the vital role of the coupling of the positive and negative feedback loops on the regulation of the TGF-? signalling system. The incorporation of time-delays for the negative feedback loop improved the accuracy, stability and robustness of the model. This model reproduces both the short-term and long-term switching responses for the intracellular signalling pathways at different TGF-? concentrations. We have tested the model against experimental data from MEF (mouse embryonic fibroblasts) WT, SV40-immortalized MEFs and Gp130 ^F/F MEFs. The predictions from the RF- model are consistent with the experimental data.

Conclusions

Signalling feedback loops are required to model TGF-? signal transduction and its effects on normal and cancer cells. We focus on the effects of time-delayed feedback loops and their coupling to ligand stimulation in this system. The model was simplified and reduced to its key components using standard methods and the rapid equilibrium assumption. We detected differences in short-term and long-term signal switching. The results from the RF- model compare well with experimental data and predict the dynamics of TGF-? signalling in cancer cells with different mutations.

SUBMITTER: Khatibi S

PROVIDER: S-EPMC5390422 | biostudies-literature | 2017 Apr

REPOSITORIES: biostudies-literature

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Mathematical model of TGF-βsignalling: feedback coupling is consistent with signal switching.

Khatibi Shabnam S Zhu Hong-Jian HJ Wagner John J Tan Chin Wee CW Manton Jonathan H JH Burgess Antony W AW

BMC systems biology 20170413 1

<h4>Background</h4>Transforming growth factor β (TGF-β) signalling regulates the development of embryos and tissue homeostasis in adults. In conjunction with other oncogenic changes, long-term perturbation of TGF-β signalling is associated with cancer metastasis. Although TGF-β signalling can be complex, many of the signalling components are well defined, so it is possible to develop mathematical models of TGF-β signalling using reduction and scaling methods. The parameterization of our TGF-β si ...[more]

PMID: 28407804

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