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IRE1? nucleotide sequence cleavage specificity in the unfolded protein response.

ABSTRACT: Inositol-requiring enzyme 1 (IRE1) is a conserved sensor of the unfolded protein response that has protein kinase and endoribonuclease (RNase) enzymatic activities and thereby initiates HAC1/XBP1 splicing. Previous studies demonstrated that human IRE1? (hIRE1?) does not cleave Saccharomyces cerevisiae HAC1 mRNA. Using an in vitro cleavage assay, we show that adenine to cytosine nucleotide substitution at the +1 position in the 3' splice site of HAC1 RNA is required for specific cleavage by hIRE1?. A similar restricted nucleotide specificity in the RNA substrate was observed for XBP1 splicing in vivo. Together these findings underscore the essential role of cytosine nucleotide at +1 in the 3' splice site for determining cleavage specificity of hIRE1?.

SUBMITTER: Poothong J

PROVIDER: S-EPMC5436603 | biostudies-literature | 2017 Jan

REPOSITORIES: biostudies-literature

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IRE1α nucleotide sequence cleavage specificity in the unfolded protein response.

Poothong Juthakorn J Sopha Pattarawut P Kaufman Randal J RJ Tirasophon Witoon W

FEBS letters 20170117 2

Inositol-requiring enzyme 1 (IRE1) is a conserved sensor of the unfolded protein response that has protein kinase and endoribonuclease (RNase) enzymatic activities and thereby initiates HAC1/XBP1 splicing. Previous studies demonstrated that human IRE1α (hIRE1α) does not cleave Saccharomyces cerevisiae HAC1 mRNA. Using an in vitro cleavage assay, we show that adenine to cytosine nucleotide substitution at the +1 position in the 3' splice site of HAC1 RNA is required for specific cleavage by hIRE1 ...[more]

PMID: 28027394

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