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An Ensemble Spatiotemporal Model for Predicting PM2.5 Concentrations.

ABSTRACT: Although fine particulate matter with a diameter of <2.5 μm (PM2.5) has a greater negative impact on human health than particulate matter with a diameter of <10 μm (PM10), measurements of PM2.5 have only recently been performed, and the spatial coverage of these measurements is limited. Comprehensively assessing PM2.5 pollution levels and the cumulative health effects is difficult because PM2.5 monitoring data for prior time periods and certain regions are not available. In this paper, we propose a promising approach for robustly predicting PM2.5 concentrations. In our approach, a generalized additive model is first used to quantify the non-linear associations between predictors and PM2.5, the bagging method is used to sample the dataset and train different models to reduce the bias in prediction, and the variogram for the daily residuals of the ensemble predictions is then simulated to improve our predictions. Shandong Province, China, is the study region, and data from 96 monitoring stations were included. To train and validate the models, we used PM2.5 measurement data from 2014 with other predictors, including PM10 data, meteorological parameters, remote sensing data, and land-use data. The validation results revealed that the R² value was improved and reached 0.89 when PM10 was used as a predictor and a kriging interpolation was performed for the residuals. However, when PM10 was not used as a predictor, our method still achieved a CV R² value of up to 0.86. The ensemble of spatial characteristics of relevant factors explained approximately 32% of the variance and improved the PM2.5 predictions. The spatiotemporal modeling approach to estimating PM2.5 concentrations presented in this paper has important implications for assessing PM2.5 exposure and its cumulative health effects.

SUBMITTER: Li L

PROVIDER: S-EPMC5451999 | biostudies-literature |

REPOSITORIES: biostudies-literature

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Project description:Various approaches have been proposed to model PM2.5 in the recent decade, with satellite-derived aerosol optical depth, land-use variables, chemical transport model predictions, and several meteorological variables as major predictor variables. Our study used an ensemble model that integrated multiple machine learning algorithms and predictor variables to estimate daily PM2.5 at a resolution of 1?km?×?1?km across the contiguous United States. We used a generalized additive model that accounted for geographic difference to combine PM2.5 estimates from neural network, random forest, and gradient boosting. The three machine learning algorithms were based on multiple predictor variables, including satellite data, meteorological variables, land-use variables, elevation, chemical transport model predictions, several reanalysis datasets, and others. The model training results from 2000 to 2015 indicated good model performance with a 10-fold cross-validated R2 of 0.86 for daily PM2.5 predictions. For annual PM2.5 estimates, the cross-validated R2 was 0.89. Our model demonstrated good performance up to 60??g/m3. Using trained PM2.5 model and predictor variables, we predicted daily PM2.5 from 2000 to 2015 at every 1?km?×?1?km grid cell in the contiguous United States. We also used localized land-use variables within 1?km?×?1?km grids to downscale PM2.5 predictions to 100?m?×?100?m grid cells. To characterize uncertainty, we used meteorological variables, land-use variables, and elevation to model the monthly standard deviation of the difference between daily monitored and predicted PM2.5 for every 1?km?×?1?km grid cell. This PM2.5 prediction dataset, including the downscaled and uncertainty predictions, allows epidemiologists to accurately estimate the adverse health effect of PM2.5. Compared with model performance of individual base learners, an ensemble model would achieve a better overall estimation. It is worth exploring other ensemble model formats to synthesize estimations from different models or from different groups to improve overall performance.

Project description:BackgroundAccurate estimation of historical PM2.5 (particle matter with an aerodynamic diameter of less than 2.5μm) is critical and essential for environmental health risk assessment.ObjectivesThe aim of this study was to develop a multiple-level stacked ensemble machine learning framework for improving the estimation of the daily ground-level PM2.5 concentrations.MethodsAn innovative deep ensemble machine learning framework (DEML) was developed to estimate the daily PM2.5 concentrations. The framework has a three-stage structure: At the first stage, four base models [gradient boosting machine (GBM), support vector machine (SVM), random forest (RF), and eXtreme gradient boosting (XGBoost)] were used to generate a new data set of PM2.5 concentrations for training the next-stage learners. At the second stage, three meta-models [RF, XGBoost, and Generalized Linear Model (GLM)] were used to estimate PM2.5 concentrations using a combination of the original data set and the predictions from the first-stage models. At the third stage, a nonnegative least squares (NNLS) algorithm was employed to obtain the optimal weights for PM2.5 estimation. We took the data from 133 monitoring stations in Italy as an example to implement the DEML to predict daily PM2.5 at each 1km×1km grid cell from 2015 to 2019 across Italy. We evaluated the model performance by performing 10-fold cross-validation (CV) and compared it with five benchmark algorithms [GBM, SVM, RF, XGBoost, and Super Learner (SL)].ResultsThe results revealed that the PM2.5 prediction performance of DEML [coefficients of determination (R2)=0.87 and root mean square error (RMSE)=5.38μg/m3] was superior to any benchmark models (with R2 of 0.51, 0.76, 0.83, 0.70, and 0.83 for GBM, SVM, RF, XGBoost, and SL approach, respectively). DEML displayed reliable performance in capturing the spatiotemporal variations of PM2.5 in Italy.DiscussionThe proposed DEML framework achieved an outstanding performance in PM2.5 estimation, which could be used as a tool for more accurate environmental exposure assessment. https://doi.org/10.1289/EHP9752.

Project description:Predicting long-term spatiotemporal characteristics of fine particulate matter (PM2.5) is important in China to understand historical levels of PM2.5, to support health effects research of both long-term and short-term exposures to PM2.5, and to evaluate the efficacy of air pollution control policies. Satellite-retrieved aerosol optical depth (AOD) provides a unique opportunity to characterize the long-term trends of ground-level PM2.5 at high spatial resolution. However, the missing rate of AOD in Northeastern China (NEC) is very high, especially in winter, and challenges the accuracy of long-term predictions of PM2.5 if left unresolved. Using random forest algorithms, this study developed a gap-filling approach combing satellite AOD, meteorological data, land use parameters, population and visibility in the NEC during 2005-2016. The model, including all predictors, combined with a model without AOD was able to fill the gap of PM2.5 predictions caused by missing AOD at 1-km resolution. The R2 (RMSE) of the full-coverage predictions was 0.81 (18.5 μg/m3) at the daily level. Gap-filled PM2.5 predictions on days with missing AOD reduced the relative prediction error from 28% to 2.5% in winter. The leave-one-year-out-cross-validation R2 (RMSE) of the full-coverage predictions was 0.65 (16.3 μg/m3) at the monthly level, indicating relatively high accuracy of predicted historical PM2.5 concentrations. Our results suggested that AOD helped increase the reliability of historical PM2.5 prediction when ground PM2.5 measurements were unavailable, even though predictions from the AOD model only accounted for approximate 37% of the whole dataset. Predicted PM2.5 level in NEC have increased since 2005, reached its peak during 2013-2015, then saw a major decline in 2016. Our high-resolution predictions also showed a south to north gradient and many pollution hot spots in the city clusters surrounding provincial capitals, as well as within large cities. Overall, by combining predictions from the AOD model with higher accuracy and predictions from the non-AOD model to achieve full coverage, our modeling approach could produce long-term, full-coverage historical PM2.5 levels in high-latitude areas in China, despite the widespread and persistent AOD missingness.

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An Ensemble Spatiotemporal Model for Predicting PM2.5 Concentrations.

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