Unknown

Dataset Information

0

Remodeling of the cycling transcriptome of the oyster Crassostrea gigas by the harmful algae Alexandrium minutum.


ABSTRACT: As a marine organism, the oyster Crassostrea gigas inhabits a complex biotope governed by interactions between the moon and the sun cycles. We used next-generation sequencing to investigate temporal regulation of oysters under light/dark entrainment and the impact of harmful algal exposure. We found that ?6% of the gills' transcriptome exhibits circadian expression, characterized by a nocturnal and bimodal pattern. Surprisingly, a higher number of ultradian transcripts were also detected under solely circadian entrainment. The results showed that a bloom of Alexandrium minutum generated a remodeling of the bivalve's temporal structure, characterized by a loss of oscillations, a genesis of de novo oscillating transcripts, and a switch in the period of oscillations. These findings provide unprecedented insights into the diurnal landscape of the oyster's transcriptome and pleiotropic remodeling due to toxic algae exposure, revealing the intrinsic plasticity of the cycling transcriptome in oysters.

SUBMITTER: Payton L 

PROVIDER: S-EPMC5471176 | biostudies-literature | 2017 Jun

REPOSITORIES: biostudies-literature

altmetric image

Publications

Remodeling of the cycling transcriptome of the oyster Crassostrea gigas by the harmful algae Alexandrium minutum.

Payton Laura L   Perrigault Mickael M   Hoede Claire C   Massabuau Jean-Charles JC   Sow Mohamedou M   Huvet Arnaud A   Boullot Floriane F   Fabioux Caroline C   Hegaret Hélène H   Tran Damien D  

Scientific reports 20170614 1


As a marine organism, the oyster Crassostrea gigas inhabits a complex biotope governed by interactions between the moon and the sun cycles. We used next-generation sequencing to investigate temporal regulation of oysters under light/dark entrainment and the impact of harmful algal exposure. We found that ≈6% of the gills' transcriptome exhibits circadian expression, characterized by a nocturnal and bimodal pattern. Surprisingly, a higher number of ultradian transcripts were also detected under s  ...[more]

Similar Datasets

2017-11-20 | E-MTAB-5345 | biostudies-arrayexpress
2014-07-26 | GSE31011 | GEO
| S-EPMC5898264 | biostudies-other
| S-EPMC5224872 | biostudies-other
2014-07-26 | E-GEOD-31011 | biostudies-arrayexpress
| S-EPMC3877888 | biostudies-literature
2012-12-15 | GSE38022 | GEO
| S-EPMC4728546 | biostudies-literature
| S-EPMC4608825 | biostudies-literature
| PRJEB18614 | ENA