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Chemistry informer libraries: a chemoinformatics enabled approach to evaluate and advance synthetic methods.


ABSTRACT: Major new advances in synthetic chemistry methods are typically reported using simple, non-standardized reaction substrates, and reaction failures are rarely documented. This makes the evaluation and choice of a synthetic method difficult. We report a standardized complex molecule diagnostic approach using collections of relevant drug-like molecules which we call chemistry informer libraries. With this approach, all chemistry results, successes and failures, can be documented to compare and evolve synthetic methods. To aid in the visualization of chemistry results in drug-like physicochemical space we have used an informatics methodology termed principal component analysis. We have validated this method using palladium- and copper-catalyzed reactions, including Suzuki-Miyaura, cyanation and Buchwald-Hartwig amination.

SUBMITTER: Kutchukian PS 

PROVIDER: S-EPMC5477042 | biostudies-literature | 2016 Apr

REPOSITORIES: biostudies-literature

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Chemistry informer libraries: a chemoinformatics enabled approach to evaluate and advance synthetic methods.

Kutchukian Peter S PS   Dropinski James F JF   Dykstra Kevin D KD   Li Bing B   DiRocco Daniel A DA   Streckfuss Eric C EC   Campeau Louis-Charles LC   Cernak Tim T   Vachal Petr P   Davies Ian W IW   Krska Shane W SW   Dreher Spencer D SD  

Chemical science 20160126 4


Major new advances in synthetic chemistry methods are typically reported using simple, non-standardized reaction substrates, and reaction failures are rarely documented. This makes the evaluation and choice of a synthetic method difficult. We report a standardized complex molecule diagnostic approach using collections of relevant drug-like molecules which we call chemistry informer libraries. With this approach, all chemistry results, successes and failures, can be documented to compare and evol  ...[more]

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