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Affimer proteins are versatile and renewable affinity reagents.


ABSTRACT: Molecular recognition reagents are key tools for understanding biological processes and are used universally by scientists to study protein expression, localisation and interactions. Antibodies remain the most widely used of such reagents and many show excellent performance, although some are poorly characterised or have stability or batch variability issues, supporting the use of alternative binding proteins as complementary reagents for many applications. Here we report on the use of Affimer proteins as research reagents. We selected 12 diverse molecular targets for Affimer selection to exemplify their use in common molecular and cellular applications including the (a) selection against various target molecules; (b) modulation of protein function in vitro and in vivo; (c) labelling of tumour antigens in mouse models; and (d) use in affinity fluorescence and super-resolution microscopy. This work shows that Affimer proteins, as is the case for other alternative binding scaffolds, represent complementary affinity reagents to antibodies for various molecular and cell biology applications.

SUBMITTER: Tiede C 

PROVIDER: S-EPMC5487212 | biostudies-literature | 2017 Jun

REPOSITORIES: biostudies-literature

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Affimer proteins are versatile and renewable affinity reagents.

Tiede Christian C   Bedford Robert R   Heseltine Sophie J SJ   Smith Gina G   Wijetunga Imeshi I   Ross Rebecca R   AlQallaf Danah D   Roberts Ashley Pe AP   Balls Alexander A   Curd Alistair A   Hughes Ruth E RE   Martin Heather H   Needham Sarah R SR   Zanetti-Domingues Laura C LC   Sadigh Yashar Y   Peacock Thomas P TP   Tang Anna A AA   Gibson Naomi N   Kyle Hannah H   Platt Geoffrey W GW   Ingram Nicola N   Taylor Thomas T   Coletta Louise P LP   Manfield Iain I   Knowles Margaret M   Bell Sandra S   Esteves Filomena F   Maqbool Azhar A   Prasad Raj K RK   Drinkhill Mark M   Bon Robin S RS   Patel Vikesh V   Goodchild Sarah A SA   Martin-Fernandez Marisa M   Owens Ray J RJ   Nettleship Joanne E JE   Webb Michael E ME   Harrison Michael M   Lippiat Jonathan D JD   Ponnambalam Sreenivasan S   Peckham Michelle M   Smith Alastair A   Ferrigno Paul Ko PK   Johnson Matt M   McPherson Michael J MJ   Tomlinson Darren Charles DC  

eLife 20170627


Molecular recognition reagents are key tools for understanding biological processes and are used universally by scientists to study protein expression, localisation and interactions. Antibodies remain the most widely used of such reagents and many show excellent performance, although some are poorly characterised or have stability or batch variability issues, supporting the use of alternative binding proteins as complementary reagents for many applications. Here we report on the use of Affimer p  ...[more]

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