Dataset Information

290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology.

ABSTRACT: The Tara Oceans Expedition has provided large, publicly-accessible microbial metagenomic datasets from a circumnavigation of the globe. Utilizing several size fractions from the samples originating in the Mediterranean Sea, we have used current assembly and binning techniques to reconstruct 290 putative draft metagenome-assembled bacterial and archaeal genomes, with an estimated completion of ?50%, and an additional 2,786 bins, with estimated completion of 0-50%. We have submitted our results, including initial taxonomic and phylogenetic assignments, for the putative draft genomes to open-access repositories for the scientific community to use in ongoing research.

SUBMITTER: Tully BJ

PROVIDER: S-EPMC5507172 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

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290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology.

Tully Benjamin J BJ Sachdeva Rohan R Graham Elaina D ED Heidelberg John F JF

PeerJ 20170710

The <i>Tara Oceans</i> Expedition has provided large, publicly-accessible microbial metagenomic datasets from a circumnavigation of the globe. Utilizing several size fractions from the samples originating in the Mediterranean Sea, we have used current assembly and binning techniques to reconstruct 290 putative draft metagenome-assembled bacterial and archaeal genomes, with an estimated completion of ≥50%, and an additional 2,786 bins, with estimated completion of 0-50%. We have submitted our res ...[more]

PMID: 28713657

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Dataset Information

290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology.

Publications

290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology.

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