Ecological Network Inference From Long-Term Presence-Absence Data.
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ABSTRACT:
SUBMITTER: Sander EL
PROVIDER: S-EPMC5541006 | biostudies-literature | 2017 Aug
REPOSITORIES: biostudies-literature
Publications
Ecological Network Inference From Long-Term Presence-Absence Data.
Sander Elizabeth L EL Wootton J Timothy JT Allesina Stefano S
Scientific reports 20170802 1
Ecological communities are characterized by complex networks of trophic and nontrophic interactions, which shape the dy-namics of the community. Machine learning and correlational methods are increasingly popular for inferring networks from co-occurrence and time series data, particularly in microbial systems. In this study, we test the suitability of these methods for inferring ecological interactions by constructing networks using Dynamic Bayesian Networks, Lasso regression, and Pear-son's cor ...[more]
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