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Role of the LF-SINE-Derived Distal ISL1 Enhancer in Patients with Classic Bladder Exstrophy.


ABSTRACT: A genome-wide association study and meta-analysis identified ISL1 as the first genome-wide significant susceptibility gene for classic bladder exstrophy (CBE). A short interspersed repetitive element (SINE), first detected in lobe-finned fishes (LF-SINE), was shown to drive Isl1 expression in embryonic mouse genital eminence. Hence, we assumed this enhancer a conclusive target for mutations associated with CBE formation and analyzed a cohort of 200 CBE patients. Although we identified two enhancer variants in five CBE patients, their clinical significance seems unlikely, implying that sequence variants in the ISL1 LF-SINE enhancer are not frequently associated with CBE.

SUBMITTER: Zhang R 

PROVIDER: S-EPMC5548531 | biostudies-literature | 2017 Sep

REPOSITORIES: biostudies-literature

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Role of the LF-SINE-Derived Distal <i>ISL1</i> Enhancer in Patients with Classic Bladder Exstrophy.

Zhang Rong R   Knapp Michael M   Kause Franziska F   Reutter Heiko H   Ludwig Michael M  

Journal of pediatric genetics 20170421 3


A genome-wide association study and meta-analysis identified <i>ISL1</i> as the first genome-wide significant susceptibility gene for classic bladder exstrophy (CBE). A short interspersed repetitive element (SINE), first detected in lobe-finned fishes (LF-SINE), was shown to drive <i>Isl1</i> expression in embryonic mouse genital eminence. Hence, we assumed this enhancer a conclusive target for mutations associated with CBE formation and analyzed a cohort of 200 CBE patients. Although we identif  ...[more]

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