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The remnant of the European rabbit (Oryctolagus cuniculus) IgD gene.


ABSTRACT: Although IgD first appeared, along with IgM, in the cartilaginous fishes and has been retained throughout subsequent vertebrate evolution, it has been lost in a diverse group of vertebrate species. We previously showed that, unlike vertebrates that express IgD, the rabbit lacks an IgD (C?) gene within 13.5 kb downstream of the IgM gene. We report here that, by conducting BLAST searches of rabbit Ig heavy chain genomic DNA with known mammalian IgD exons, we identified the remnant of the rabbit C? gene approximately 21 kb downstream of the IgM gene. The remnant C? locus lacks the ?CH1 and hinge exons, but contains truncated ?CH2 and ?CH3 exons, as well as largely intact, but non-functional, secretory and transmembrane exons. In addition, we report that the C? gene probably became non-functional in leporids at least prior to the divergence of rabbits and hares ~12 million years ago.

SUBMITTER: Lanning DK 

PROVIDER: S-EPMC5568218 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

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The remnant of the European rabbit (Oryctolagus cuniculus) IgD gene.

Lanning Dennis K DK   Esteves Pedro J PJ   Knight Katherine L KL  

PloS one 20170823 8


Although IgD first appeared, along with IgM, in the cartilaginous fishes and has been retained throughout subsequent vertebrate evolution, it has been lost in a diverse group of vertebrate species. We previously showed that, unlike vertebrates that express IgD, the rabbit lacks an IgD (Cδ) gene within 13.5 kb downstream of the IgM gene. We report here that, by conducting BLAST searches of rabbit Ig heavy chain genomic DNA with known mammalian IgD exons, we identified the remnant of the rabbit Cδ  ...[more]

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