Browse
Submit Data
Databases
API
Help

Dataset Information

20 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

A mesocosm study of oxygen and trace metal dynamics in sediment microniches of reactive organic material.

ABSTRACT: Deposition of particulate organic matter (POM) induces diagenetic hot spots at the sediment-water interface (SWI). Here we explore the effects of intensive POM degradation for metal mobilization at the SWI. By using a combined planar optode-DGT (diffusive gradient in thin-films) sensor we obtained simultaneous measurements of dissolved O₂ and trace metal dynamics around an aggregate of reactive organic matter placed on the SWI of a sediment mesocosm. The aggregate induced a rapid, highly localized, decrease in O₂ concentration, resulting in an anoxic feature at the SWI. Co-located with this feature, we observed intense Fe and Mn mobilization, removal of Co, Ni and Zn and found evidence for the concurrent release and precipitation of Pb within a small confined volume. We also identified two small microniches in the anoxic sediment below the SWI, defined by elevated trace metal mobilization. Differences between the metal release rates in these two microniches indicate that they were formed by the mineralisation of different types of organic matter buried in the sediment. Our results provide direct empirical evidence for the potential importance of POM-induced reactive microniches when considering the fluxes of metals from and within aquatic sediments, and suggest that other elements' cycles may also be affected.

SUBMITTER: Lehto NJ

PROVIDER: S-EPMC5595988 | biostudies-literature |

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Similar Datasets

Trace metal

Project description:Specific effect of trace metals on marine heterotrophic microbial activity and diversity

| PRJNA504304 | ENA

Sediment organic carbon and temperature effects on methylmercury concentration: A mesocosm experiment.

Project description:The fate and mobility of mercury, and its bioaccumulation primarily as methylmercury (MeHg), in marine ecosystems are influenced by climate related environmental factors, including increased temperature and carbon loading. To investigate the interactions between sediment organic carbon and temperature MeHg bioaccumulation, mesocosm experiments were conducted examining relationships between sediment, water column and biota (sediment-dwelling amphipod and juvenile oyster) MeHg concentration. Experimental treatments consisted of a two by two design of high and low temperature (15 & 25 °C) and high and low sediment organic carbon (4-5% and 13% LOI, pre-experiment). Sediment organic carbon had significant individual effects on MeHg concentration in water and biota, with higher carbon associated with lower MeHg. Temperature individual effects were significant for sediment, water, and only amphipod MeHg concentration, with higher temperature treatments indicating higher MeHg concentration. There were significant temperature × carbon interactions observed for sediment, dissolved, and oyster MeHg concentration. Sediment carbon reduction had greater influence than temperature on increasing MeHg concentrations in both the water column and biota. MeHg concentrations in the bulk sediment were not correlated with MeHg in the water column or in the biota, indicating that even when sediments are the only source of MeHg, bulk sediment measurements do not provide a good proxy for bioaccumulation and that the concentration in bulk sediments is not the primary determinant of MeHg entry into the food web.

| S-EPMC6461384 | biostudies-literature

Accumulation of Trace Metal Elements (Cu, Zn, Cd, and Pb) in Surface Sediment via Decomposed Seagrass Leaves: A Mesocosm Experiment Using Zostera marina L.

Project description:Accumulation of Cu, Zn, Cd, and Pb in the sediment of seagrass ecosystems was examined using mesocosm experiments containing Zostera marina (eelgrass) and reference pools. Lead was approximately 20-fold higher in the surface sediment in the eelgrass pool than in eelgrass leaves and epiphytes on the eelgrass leaves, whereas zinc and cadmium were significantly lower in the surface sediment than in the leaves, with intermediate concentrations in epiphytes. Copper concentrations were similar in both the surface sediment and leaves but significantly lower in epiphytes. Carbon and nitrogen contents increased significantly with increasing ?13C in surface sediments of both the eelgrass and reference pools. Copper, Zn, Cd, and Pb also increased significantly with increasing ?13C in the surface sediment in the eelgrass pool but not in the reference pool. By decomposition of eelgrass leaves with epiphytes, which was examined in the eelgrass pool, copper and lead concentrations increased more than 2-fold and approximately a 10-fold, whereas zinc and cadmium concentrations decreased. The high copper and lead concentrations in the surface sediment result from accumulation in decomposed, shed leaves, whereas zinc and cadmium remobilized from decomposed shed leaves but may remain at higher concentrations in the leaves than in the original sediments. The results of our mesocosm study demonstrate that whether the accumulation or remobilization of trace metals during the decomposition of seagrass leaves is trace metal dependent, and that the decomposed seagrass leaves can cause copper and lead accumulation in sediments in seagrass ecosystems.

| S-EPMC4919015 | biostudies-other

Effect of Acidic Industrial Effluent Release on Microbial Diversity and Trace Metal Dynamics During Resuspension of Coastal Sediment.

Project description:Both industrial effluent discharge and the resuspension of contaminated marine sediments are important sources of trace metals in seawater which potentially affect marine ecosystems. The aim of this study was to evaluate the impact of the industrial wastewaters having acidic pH (2-3) and containing trace metals on microbial diversity in the coastal ecosystem of the Gulf of Gabès (Tunisia, southern Mediterranean Sea) subjected to resuspension events of marine sediments. Four trace elements (As, Cd, U, and V) were monitored during 10-day sediment resuspension experiments. The highest enrichment in the seawater dissolved phase was observed for Cd followed by U, V, and As. Cd remobilization was improved by indigenous microbial community, while U release was mainly abiotic. Acidic effluent addition impacted both trace metal distribution and microbial diversity, particularly that of the abundant phylum Bacteroidetes. Members of the order Saprospirales were enriched from sediment in natural seawater (initial pH > 8), while the family Flavobacteriaceae was favored by acidified seawater (initial pH < 8). Some Flavobacteriaceae members were identified as dominant species in both initial sediment and experiments with acidic wastewater, in which their relative abundance increased with increasing dissolved Cd levels. It could be therefore possible to consider them as bioindicators of metal pollution and/or acidification in marine ecosystems.

| S-EPMC6302000 | biostudies-literature

Trace element and metal sequestration in vitellaria and sclerites, and reactive oxygen intermediates in a freshwater monogenean, Paradiplozoon ichthyoxanthon.

Project description:Exposure to metals and other trace elements negatively affects infection dynamics of monogeneans, including diplozoids, but, physiological mechanisms linked to exposure have yet to be documented. In this study sequestration of trace elements and reactive oxygen intermediate production in the monogenean, Paradiplozoon ichthyoxanthon, was demonstrated. During dissection of host fish, Labeobarbus aeneus, the gills were excised and assessed for P. ichthyoxanthon, which were removed and frozen for fluorescence microscopy or fixed for transmission electron microscopy. Trace elements were sequestered in the vitellaria and sclerites in P. ichthyoxanthon, and the presence of reactive oxygen intermediates was observed predominantly in the tegument of the parasite. Trace elements and metals identified and ranked according to weight percentages (wt%) in the vitellaria were Cu > C > Au > O > Cr > Fe > Si while for the sclerites C > Cu > O > Au > Fe > Cr > Si were identified. For most element detected, readings were higher in the vitellaria than the sclerites, except for C and O which were higher in sclerites. Specifically for metals, all levels detected in the vitellaria were greater than in sclerites. Based on the proportion of trace elements present in the vitellaria and sclerites it appears that most trace elements including metals were sequestered in the vitellaria. The results of reactive oxygen intermediate production in the tegument of the parasite suggests either trace element accumulation takes place across the tegument or results from the action of the host's immune response on the parasite. The results serve as the first demonstration of trace element sequestration and reactive oxygen intermediates in a freshwater monogenean parasite.

| S-EPMC5428946 | biostudies-literature

Trace Oxygen Sensitive Material Based on Two Porphyrin Derivatives in a Heterodimeric Complex.

Project description:The successful preparation of a novel dimer complex formed between 5,10,15,20-tetrakis(3,4-dimethoxyphenyl)-porphyrin Fe(III) chloride and (5,10,15,20-tetraphenylporphinato) dichlorophosphorus(V) chloride using the well-known reactivity of the P-X bond is reported. The obtained complex was characterized by UV-vis, Fourier transform infrared spectroscopy (FT-IR), fluorescence, ¹H-NMR, 13C-NMR, and 31P-NMR spectroscopic techniques and also by additional Heteronuclear Single Quantum Coherence (HSQC) and Heteronuclear Multiple Bond Correlation (HMBC) experiments in order to correctly assign the NMR signals. Scanning electron microscopy (SEM) and EDX quantifications completed the characterizations. This novel porphyrin dimer complex demonstrated fluorescence sensing of H₂O₂ in water for low oxygen concentrations in the range of 40-90 µM proving medical relevance for early diagnosis of diseases such as Alzheimer's, Parkinson's, Huntington's, and even cancer because higher concentrations of H₂O₂ than 50 μM are consideredcytotoxic for life. Due to its optical properties, this novel metalloporphyrin-porphyrin based complex is expected to show PDT and bactericidal activity under visible-light irradiation.

| S-EPMC6151409 | biostudies-literature

Contribution of hurricane-induced sediment resuspension to coastal oxygen dynamics.

Project description:Hurricanes passing over the ocean can mix the water column down to great depths and resuspend massive volumes of sediments on the continental shelves. Consequently, organic carbon and reduced inorganic compounds associated with these sediments can be resuspended from anaerobic portions of the seabed and re-exposed to dissolved oxygen (DO) in the water column. This process can drive DO consumption as sediments become oxidized. Previous studies have investigated the effect of hurricanes on DO in different coastal regions of the world, highlighting the alleviation of hypoxic conditions by extreme winds, which drive vertical mixing and re-aeration of the water column. However, the effect of hurricane-induced resuspended sediments on DO has been neglected. Here, using a diverse suite of datasets for the northern Gulf of Mexico, we find that in the few days after a hurricane passage, decomposition of resuspended shelf sediments consumes up to a fifth of the DO added to the bottom of the water column during vertical mixing. Despite uncertainty in this value, we highlight the potential significance of this mechanism for DO dynamics. Overall, sediment resuspension likely occurs over all continental shelves affected by tropical cyclones, potentially impacting global cycles of marine DO and carbon.

| S-EPMC6200824 | biostudies-other

A dynamic and multi-responsive porous flexible metal-organic material.

Project description:Stimuli responsive materials (SRMs) respond to environmental changes through chemical and/or structural transformations that can be triggered by interactions at solid-gas or solid-liquid interfaces, light, pressure or temperature. SRMs span compositions as diverse as organic polymers and porous inorganic solids such as zeolites. Metal-organic materials (MOMs), sustained by metal nodes and organic linker ligands are of special interest as SRMs. SR-MOMs have thus far tended to exhibit only one type of transformation, e.g. breathing, in response to one stimulus, e.g. pressure change. We report [Zn2(4,4'-biphenyldicarboxylate)2(4,4'-bis(4-pyridyl)biphenyl)]n, an SR-MOM, which exhibits six distinct phases and four types of structural transformation in response to various stimuli. The observed structural transformations, breathing, structural isomerism, shape memory effect, and change in the level of interpenetration, are previously known individually but have not yet been reported to exist collectively in the same compound. The multi-dynamic nature of this SR-MOM is mainly characterised by using in-situ techniques.

| S-EPMC6079025 | biostudies-literature

Missing-linker metal-organic frameworks for oxygen evolution reaction.

Project description:Metal-organic frameworks (MOFs) have been recognized as compelling platforms for the development of miscellaneous applications because of their structural diversity and functional tunability. Here, we propose that the electrocatalytic properties could be well modified by incorporating missing linkers into the MOF. Theoretical calculations suggest the electronic structure of MOFs can be tuned by introducing missing linkers, which improves oxygen evolution reaction (OER) performance of the MOF. Inspired by these aspects, we introduced various missing linkers into a layered-pillared MOF Co2(OH)2(C8H4O4) (termed as CoBDC) to prepare missing-linker MOFs. Transmission electron microscope and synchrotron X-ray measurements confirmed that the missing linkers in the MOF could be introduced and well controlled by our strategy. The self-supported MOF nanoarrays with missing linkers of carboxyferrocene exhibit excellent OER performance with ultralow overpotential of 241 mV at 100 mA cm-2. This work opens a new prospect to develop efficient MOF-based electrocatalysts by introducing missing linkers.

| S-EPMC6834668 | biostudies-literature

E.coli trace metal metabolic shifts

Project description:Testing the results of trace metals modulation in E. coli metabolism

| PRJEB77037 | ENA