Viewing RNA-seq data on the entire human genome.
Ontology highlight
ABSTRACT:
SUBMITTER: Weitz EM
PROVIDER: S-EPMC5605993 | biostudies-literature | 2017
REPOSITORIES: biostudies-literature
Publications
Viewing RNA-seq data on the entire human genome.
Weitz Eric M EM Pantano Lorena L Zhu Jingzhi J Upton Bennett B Busby Ben B
F1000Research 20170428
RNA-Seq Viewer is a web application that enables users to visualize genome-wide expression data from NCBI's Sequence Read Archive (SRA) and Gene Expression Omnibus (GEO) databases. The application prototype was created by a small team during a three-day hackathon facilitated by NCBI at Brandeis University. The backend data pipeline was developed and deployed on a shared AWS EC2 instance. Source code is available at https://github.com/NCBI-Hackathons/rnaseqview. ...[more]
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