Browse
Submit Data
Databases
API
Help

Dataset Information

19 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Stipa pennata subsp. ceynowae (Poaceae, Pooideae), a new taxon from Central Europe.

ABSTRACT: Based on numerical analyses of macromorphological characters, scanning electron microscopy observation of leaves and lemma micromorphology, as well as field observations, Stipa pennata subsp. ceynowae was described here as a new taxon from Poland. It differs from the most similar S. pennata subsp. pennata and S. borysthenica mainly by its longer ligules of vegetative shoots. The affinities of this taxon are discussed and a morphological comparison with related species is provided. Illustrations and images of the micromorphological structures, as well as information about its distribution, habitat and conservation status are given.

SUBMITTER: Klichowska E

PROVIDER: S-EPMC5624204 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Stipa pennata subsp. ceynowae (Poaceae, Pooideae), a new taxon from Central Europe.

Klichowska Ewelina E Nobis Marcin M

PhytoKeys 20170717 83

Based on numerical analyses of macromorphological characters, scanning electron microscopy observation of leaves and lemma micromorphology, as well as field observations, Stipa pennata subsp. ceynowae was described here as a new taxon from Poland. It differs from the most similar S. pennata subsp. pennata and S. borysthenica mainly by its longer ligules of vegetative shoots. The affinities of this taxon are discussed and a morphological comparison with related species is provided. Illustr ...[more]

PMID: 29033650

Similar Datasets

Development and characterization of microsatellite markers for endangered species Stipa pennata (Poaceae) and their usefulness in intraspecific delimitation.

Project description:Stipa pennata (Poaceae), has become a rare and endangered species in Central Europe due habitat loss and fragmentation. This species is characterized by high morphological variability, which has resulted in the description of numerous intraspecific taxa. The aim of present work is to develop microsatellite markers useful in population genetics studies as well as in intraspecific taxonomy of S. pennata s.l. We developed ten microsatellite markers using Illumina high-throughput. Polymorphism at each marker was evaluated using 4-15 individuals from four morphotypes of S. pennata s.l. Seven markers showed polymorphism while three were monomorphic. The number of alleles per locus ranged from 7 to 12, and the observed and expected heterozygosity varied from 0.000 to 1.000 and 0.000 to 0.8670, respectively. Our results confirm that three of four studied morphotypes are genetically distinct. The microsatellite markers developed here will be useful for evaluating levels of genetic diversity and differentiation, to study gene flow, population dynamics and in future conservation studies as well as for intraspecific delimitation of morphologically similar taxa within S. pennata s.l.

| S-EPMC6060744 | biostudies-literature

Poa laegaardiana, a new species from Ecuador (Poaceae, Pooideae, Poeae, Poinae).

Project description:Poa laegaardianasp. nov., is described and illustrated. The new species was found growing on sandy, volcanic soil in Festuca-Calamagrostis dominated grasslands southwest of Ambato and 2.2 km from Fecundo Vela in Provincia de Bolivar. The new species is morphologically similar to Poa gigantea but differs in having glumes 3/4 to 7/8 as long as the adjacent lemmas, a callus with a sparse, short, dorsal tuft of woolly hairs, culms 50-72 cm tall and spikelets 4.1-4.8 mm long. In addition, we include a key to the narrow-spikelike panicled species of Poa in Ecuador.

| S-EPMC6023951 | biostudies-literature

A revision of Poa subsection Aphanelytrum (Poaceae, Pooideae, Poaeae, Poinae); and a new species, Poa auriculata.

Project description:In this study the peculiar Andean grass genus Aphanelytrum, with two species, is reduced to Poa subsect. Aphanelytrum comb. & stat. nov. A third species, Festuca reclinata, is assigned to the subsection, which shows states transitional between a more typical Poa and Aphanelytrum. Poa subgen. Poa supersect. Homalopoa sect. Dioicopoa subsect. Aphanelytrum comb. & stat. nov. is characterized in having stooling perennials with decumbent to spreading culm bases that continuously branch and often root at low to mid-culm nodes, glabrous spikelets with long rachillas 1.2-4.2 mm long, short glumes less than ½ the length of the florets, and lemmas with bifid apexes that are mucronate to short-awned. We provide for the three species taxonomic discussions, morphological and anatomical descriptions, keys, illustrations, and a list of specimens. Also, we provide two new names, Poa hitchcockiana nom. nov. and Poa sanchez-vegae nom. nov., and one new combination, Poa reclinata comb. nov. A new species, Poa auriculata sp. nov. from Peru, not thought to be a member of Poa subsect. Aphanelytrum, is presented. It is the first in the genus with prominent auricles. In addition, we place Poa apiculata in Poa subgen. Poa supersect. Homalopoa sect. Dioicopoa subsect. Tovarochloa comb. & stat. nov.

| S-EPMC4956932 | biostudies-literature

A phylogeny of species near Agrostis supporting the recognition of two new genera, Agrostula and Alpagrostis (Poaceae, Pooideae, Agrostidinae) from Europe.

Project description:Based on a molecular DNA phylogeny of three plastid (rpl32-trnK, rps16 intron, and rps16-trnK) and nuclear ITS regions investigating 32 species of Agrostidinae, we describe two new genera, Agrostula gen. nov. with a single species and Alpagrostis gen. nov. with four species; provide support for five species in a monophyletic Podagrostis; and include a small sample of 12 species of a monophyletic Agrostis s.s. (including the type and most species of Neoschischkinia), that separates into two clades corresponding to A. subg. Agrostis and A. subg. Vilfa. Agrostula differs from Agrostis in having leaf blades with pillars of sclerenchyma which are continuous between the adaxial and abaxial surface of the blades, dorsally rounded glumes with blunt to truncate and erose to denticulate apices, florets ½ the length of the glumes, lemmas equally wide as long, widest at (or near) apex, apices broadly truncate, irregularly 5 to 7 denticulate to erose, awnless, anthers longer than the lemmas, and rugose-papillose caryopses. Alpagrostis differs from Agrostis in having geniculate basally inserted awns and truncate lemma apices with lateral veins prolonged from the apex in (2)4 setae. The following eight new combinations are made: Agrostula truncatula, Agrostula truncatula subsp. durieui, Alpagrostis alpina, Alpagrostis alpina var. flavescens, Alpagrostis barceloi, Alpagrostis setacea, Alpagrostis setacea var. flava, and Alpagrostis schleicheri. In addition, we provide a key separating Agrostula and Alpagrostis from Agrostis s.s. and other genera previously considered as synonyms of Agrostis; lectotypify Agrostis alpina Scop., A. schleicheri Jord. & Verl., A. truncatula Parl., and A. truncatula var. durieui Henriq.; and neotypify A. setacea Curtis.

| S-EPMC7695677 | biostudies-literature

Hybridization and introgression events in cooccurring populations of closely related grasses (Poaceae: Stipa) in high mountain steppes of Central Asia.

Project description:Stipa is a genus comprising ca. 150 species found in warm temperate regions of the Old World and around 30% of its representatives are of hybrid origin. In this study, using integrative taxonomy approach, we tested the hypothesis that hybridization and introgression are the explanations of the morphological intermediacy in species belonging to Stipa sect. Smirnovia, one of the species-rich sections in the mountains of Central Asia. Two novel nothospecies, S. magnifica × S. caucasica subsp. nikolai and S. lingua × S. caucasica subsp. nikolai, were identified based on a combination of morphological characters and SNPs markers. SNPs marker revealed that all S. lingua × S. caucasica samples were F1 hybrids, whereas most of S. magnifica × S. caucasica samples were backcross hybrids. Furthermore, the above mentioned hybrids exhibit transgressive morphological characters to each of their parental species. These findings have implications for understanding the process of hybridization in the genus Stipa, particularly in the sect. Smirnovia. As a taxonomic conclusion, we describe the two new nothospecies S. × muksuensis (from Tajikistan) and S. × ochyrae (from Kyrgyzstan) and present an identification key to species morphologically similar to the taxa mentioned above.

| S-EPMC10898772 | biostudies-literature

Development and characterization of EST-SSR markers in Stipa breviflora (Poaceae).

Project description:PREMISE OF THE STUDY:Stipa breviflora (Poaceae) is one of the dominant species of the desert steppe in the eastern Eurasian grasslands. Simple sequence repeat (SSR) markers were developed for use in genetic diversity studies of this species. METHODS AND RESULTS:A total of 1954 potentially polymorphic loci were obtained by comparing transcriptome data of eight different S. breviflora individuals. We selected 81 loci to verify polymorphism and 63 loci amplified, of which 21 loci exhibited polymorphism. The number of alleles per locus varied from two to 24, the observed heterozygosity ranged from 0.083 to 0.958, and the expected heterozygosity ranged from 0.396 to 0.738. CONCLUSIONS:These newly identified SSR loci can be used for population genetic and landscape genetic studies of S. breviflora. In addition, 14 loci also amplified in six related Stipa species (S. grandis, S. krylovii, S. bungeana, S. aliena, S. gobica, and S. purpurea).

| S-EPMC5400433 | biostudies-literature

Phylogenetic implications of nuclear rRNA IGS variation in Stipa L. (Poaceae).

Project description:The article takes up the problem of deficiency of molecular marker, which could illustrate molecular variability as well as phylogenetic relation within the genus of Stipa L. (Poaceae). Researches made so far hadn't delivered sufficient information about relationships between particular taxa from the genus of Stipa. In the present study, we analyzed variability and phylogenetic informativeness of nuclear ribosomal DNA in six species from the genus against five other species from Poaceae including a division of this region into functional elements and domains. Our results showed that the intergenic spacer region, and especially its part adjacent to 26?S nrDNA, is a molecular marker giving a real chance for a phylogeny reconstruction of Stipa. The region seems to be the most phylogenetically informative for Stipa from all the chloroplast and nuclear markers tested so far. Comparative analysis of nrDNA repeat units from Stipa to other representatives of Poaceae showed that their structure does not deviate from the general scheme. However, the rate of evolution within the inter-repeats in the IGS region is extremely high and therefore it predestines the region for phylogenetic analyses of Stipa at genus level or in shallower taxonomic scale.

| S-EPMC5599551 | biostudies-literature

Typification of eight current and seven related names and a new section in the genus Bromus (Bromeae, Pooideae, Poaceae).

Project description:During our nomenclatural revision of the genus Bromus L. (Poaceae) for Flora Iberica, we found that several names were still untypified: nine names in current use or their basionyms and five synonyms. Typifications are still needed since stabilising the names will facilitate their use. We propose lectotypes for Bromusalopecuros Poir., B.contortus Desf. (and the superfluous B.alopecuroides Poir.), B.benekenii (Lange) Trimen, B.intermediusGuss.subsp.divaricatus Bonnier & Layens, B.molliformis J.Lloyd ex Billot, B.lepidus Holmb., B.lepidus f. lasiolepis Holmb., Bromussubg.Stenobromus (Griseb.) Hack. and Bromussect.Stenobromus Griseb. Neotypes for B.erectus Huds. and B.ramosus Huds. and an epitype for B.intermediussubsp.divaricatus Bonnier & Layens are proposed. In addition, we identify an isoneotype for B.erectus and isolectotypes for B.lepidus and B.lepidusf.lasiolepis. The area inhabited by the typified taxa includes both Africa and Europe. All the selected types are in agreement with the current use of the names and, thus, our selections contribute to stabilising the nomenclature of the genus Bromus. A discussion is provided to justify the selections. In addition, we typified two supraspecific names B.subg.Stenobromus and B.sect.Stenobromus. Finally, a new section, B.sect.Penicillius Llamas & Acedo, is described.

| S-EPMC6509104 | biostudies-literature

Variability of Pyrrolizidine Alkaloid Occurrence in Species of the Grass Subfamily Pooideae (Poaceae).

Project description:Pyrrolizidine alkaloids (PAs) are a class of secondary metabolites found in various unrelated angiosperm lineages including cool-season grasses (Poaceae, subfamily Pooideae). Thesinine conjugates, saturated forms of PA that are regarded as non-toxic, have been described to occur in the two grass species Lolium perenne and Festuca arundinacea (Poaceae, subfamily Pooideae). In a wider screen, we tested various species of the Pooideae lineage, grown under controlled conditions, for their ability to produce thesinine conjugates or related structures. Using an LC-MS based targeted metabolomics approach we were able to show that PA biosynthesis in grasses is limited to a group of very closely related Pooideae species that produce a limited diversity of PA structures. High variability in PA levels was observed even between individuals of the same species. These individual accumulation patterns are discussed with respect to a possible function and evolution of this type of alkaloid.

| S-EPMC5714882 | biostudies-literature

Poa magellensis (Poaceae), a new species from Central Apennine (Italy).

Project description:A new species, Poa magellensis sp. nov., is described and illustrated based on collections from the Majella Mountains in Central Apennine, Italy. It is morphologically similar to P. ligulata Boiss., but can be distinguished by green leaves, the basal ones adaxially lightly scabrous or sparsely hairy, longer ligules particularly in the upper leaves, panicles denser with primary branches sub-erect to erect, glumes with broader scarious margin, more acute glumes and lemmas, lemmas and paleas longer, rachilla hairy, calluses usually with a crown of hairs or shortly webbed, caryopses longer. A distribution map of the species is also presented.

| S-EPMC7148384 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data