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Behavior and season affect crayfish detection and density inference using environmental DNA.

ABSTRACT: Although the presence/absence of aquatic invertebrates using environmental DNA (eDNA) has been established for several species, inferring population densities has remained problematic. The invasive American signal crayfish, Pacifastacus leniusculus (Dana), is the leading cause of decline in the UK's only native crayfish species, Austropotamobius pallipes (Lereboullet). Methods to detect species at low abundances offer the opportunity for the early detection, and potential eradication, of P. leniusculus before population densities reach threatening levels in areas occupied by A. pallipes. Using a factorial experimental design with aquaria, we investigated the impacts of biomass, sex ratio, and fighting behavior on the amount of eDNA released by P. leniusculus, with the aim to infer density per aquarium depending on treatments. The amount of target eDNA in water samples from each aquarium was measured using the quantitative Polymerase Chain Reaction. We show that the presence of eggs significantly increases the concentration of crayfish eDNA per unit of mass, and that there is a significant relationship between eDNA concentration and biomass when females are egg-bearing. However, the relationship between crayfish biomass and eDNA concentration is lost in aquaria without ovigerous females. Female-specific tanks had significantly higher eDNA concentrations than male-specific tanks, and the prevention of fighting did not impact the amount of eDNA in the water. These results indicate that detection and estimate of crayfish abundance using eDNA may be more effective while females are ovigerous. This information should guide further research for an accurate estimation of crayfish biomass in the field depending on the season. Our results indicate that detection and quantification of egg-laying aquatic invertebrate species using eDNA could be most successful during periods when eggs are developing in the water. We recommend that practitioners consider the reproductive cycle of target species when attempting to study or detect aquatic species using eDNA in the field.

SUBMITTER: Dunn N

PROVIDER: S-EPMC5632632 | biostudies-literature | 2017 Oct

REPOSITORIES: biostudies-literature

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Behavior and season affect crayfish detection and density inference using environmental DNA.

Dunn Nicholas N Priestley Victoria V Herraiz Alba A Arnold Richard R Savolainen Vincent V

Ecology and evolution 20170824 19

Although the presence/absence of aquatic invertebrates using environmental DNA (eDNA) has been established for several species, inferring population densities has remained problematic. The invasive American signal crayfish, <i>Pacifastacus leniusculus</i> (Dana), is the leading cause of decline in the UK's only native crayfish species, <i>Austropotamobius pallipes</i> (Lereboullet). Methods to detect species at low abundances offer the opportunity for the early detection, and potential eradicati ...[more]

PMID: 29043033

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Project description:Quantifying the performance of animals is a powerful methodology for determining the functional consequences of morphological variation. For example, snakes consume prey whole, and variation in the anatomy of their trophic apparatus directly affects gape and limits maximal prey size. However, for the foraging ecology of snakes and other systems, scant data exist regarding how often maximal capacities are taxed in nature. Hence, we quantified: (1) maximal gape, (2) the size of prey relative to maximal gape, and (3) how the type and relative size of prey affected behavior and prey handling times (HTs) for two species of natricine snakes that primarily eat soft- (Regina septemvittata) or hard-shelled (Liodytes alleni) crayfish. Liodytes alleni had significantly larger maximal gape than R. septemvittata with equal snout-vent length. The percentages of large prey (>60% maximal gape area) consumed in the field were low in both R. septemvittata (22%) and L. alleni (2%). However, R. septemvittata, especially juveniles, ate relatively larger prey than L. alleni. Strategies for dealing with the seasonal scarcity of small crayfish differed as juvenile R. septemvittata commonly removed and ate only chelipeds from crayfish too large to swallow whole, whereas juvenile L. alleni ate many small odonate nymphs. During laboratory trials, unlike R. septemvittata, L. alleni usually used its body to restrain prey with behaviors that depended on relative prey size and prey hardness. Liodytes alleni consumed soft-shelled crayfish significantly faster than R. septemvittata and significantly faster than hard-shelled crayfish. Several of the differences in gape, prey size, and prey HTs and behavior between the crayfish-eating snakes resemble those between two phylogenetically distant species of homalopsid snakes that consume either hard- or soft-shelled crabs. In both groups of crustacean-eating snakes, the decreased capture success in captivity and the rare consumption of relatively large hard-shelled crustaceans in the field suggest that the ability to capture this type of prey constrains prey size more commonly than maximal gape. Based on data integrating snake size and gape with the relative mass of intact prey, the predicted potential feeding performance R. septemvittata consuming intact prey exceeded that of the other three species.

Dataset Information

Behavior and season affect crayfish detection and density inference using environmental DNA.

Publications

Behavior and season affect crayfish detection and density inference using environmental DNA.

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