Genome-wide analysis of structural variants reveals genetic differences in Chinese pigs.
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ABSTRACT:
SUBMITTER: Yang R
PROVIDER: S-EPMC5655481 | biostudies-literature | 2017
REPOSITORIES: biostudies-literature
Publications
Genome-wide analysis of structural variants reveals genetic differences in Chinese pigs.
Yang Ruifei R Fang Suyun S Wang Jing J Zhang Chunyuan C Zhang Ran R Liu Di D Zhao Yiqiang Y Hu Xiaoxiang X Li Ning N
PloS one 20171024 10
Pigs have experienced long-term selections, resulting in dramatic phenotypic changes. Structural variants (SVs) are reported to exert extensive impacts on phenotypic changes. We built a high resolution and informative SV map based on high-depth sequencing data from 66 Chinese domestic and wild pigs. We inferred the SV formation mechanisms in the pig genome and used SVs as materials to perform a population-level analysis. We detected the selection signals on chromosome X for northern Chinese dome ...[more]
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