Echiniscidae from the Sierra Nevada de Santa Marta, Colombia, new records and a new species of Bryodelphax Thulin, 1928 (Tardigrada).
Ontology highlight
ABSTRACT:
SUBMITTER: Lisi O
PROVIDER: S-EPMC5673971 | biostudies-literature |
REPOSITORIES: biostudies-literature
Similar Datasets
Project description:Oreosaurus is one of the two genera extracted from the former Riamasensu lato, which was recently recognized as polyphyletic. Oreosaurus is a small clade (five named and two undescribed species) of montane gymnophthalmid lizards and exhibits an exceptional distributional pattern. Its nominal and undescribed species are discontinuously distributed on the Cordillera de la Costa of Venezuela, the tepuis from the Chimantá massif in Venezuela, the highlands of the island of Trinidad, and the Sierra Nevada de Santa Marta in Colombia (SNSM). Herein, we describe the species of Oreosaurus that is endemic to the SNSM. Historically, this species associates with two names that are currently nomina nuda: Proctoporus serranus and P. specularis. Formal nomenclatural recognition of Oreosaurus serranussp. n. renders specularis a permanently unavailable name for this taxon. Oreosaurus serranussp. n. is the sister of all remaining congeners, and differs primarily from them in having only one pair of genial scales, as well as a unique pattern of scutellation. We provide an identification key to the species of Oreosaurus.
| S-EPMC5672716 | biostudies-literature
Project description:A new genus of Itaquasconinae, Meplitumen gen. nov., and a new species, Meplitumenaluna sp. nov., are described. The new genus has characters present in other genera of Itaquasconinae but in a unique combination. The spiral thickening of the bucco-pharyngeal tube is also present anteriorly to the insertion point of the stylet supports, excluding only the short portion where the apophyses for the insertion of the stylet muscles (AISM) are present. This character is similar to Astatumen Pilato, 1997 but Meplitumen gen. nov. differs from this genus as stylet furcae are shaped differently and as stylet supports and placoids are present. The presence of a spiral thickening in a portion of the buccal tube anterior to the stylet supports distinguishes the new genus from Mesocrista Pilato, 1987, Platicrista Pilato, 1987 and Itaquascon de Barros, 1939. Meplitumen gen. nov. also differs from Mesocrista, in having the caudal processes of the AISM pointing laterally (instead of postero-laterally), and the apices of the caudal processes of the stylet furcae unswollen. From Itaquascon the new genus also differs by having more robust stylet supports, pharyngeal bulb with placoids, stylet furcae differently shaped. Meplitumen gen. nov. also differs from Platicrista in having caudal processes of the AISM more robust and not flexible, and more slender stylet supports. The new species, Meplitumenaluna sp. nov., has a cuticle with a very faint roughness at the caudal extremity of the body, and eyes probably absent. The pharyngeal bulb is long, with two long, narrow, rod-shaped macroplacoids; a microplacoid and septulum are absent. The claws are well developed with main branches provided with accessory points, and at the base of the claws, a structure interpretable as a very thin lunule is present. Other cuticular thickenings on the legs are absent.
| S-EPMC6663937 | biostudies-literature
Project description:Chagas disease remains a major neglected disease in Colombia. We aimed to characterize Trypanosoma cruzi transmission networks in the Sierra Nevada de Santa Marta (SNSM) region, to shed light on disease ecology and help optimize control strategies. Triatomines were collected in rural communities and analyzed for blood feeding sources, parasite diversity and gut microbiota composition through a metagenomic and deep sequencing approach. Triatoma dimidiata predominated, followed by Rhodnius prolixus, Triatoma maculata, Rhodnius pallescens, Panstrongylus geniculatus and Eratyrus cuspidatus. Twenty-two species were identified as blood sources, resulting in an integrated transmission network with extensive connectivity among sylvatic and domestic host species. Only TcI parasites were detected, predominantly from TcIb but TcIa was also reported. The close relatedness of T. cruzi strains further supported the lack of separate transmission cycles according to habitats or triatomine species. Triatomine microbiota varied according to species, developmental stage and T. cruzi infection. Bacterial families correlated with the presence/absence of T. cruzi were identified. In conclusion, we identified a domestic transmission cycle encompassing multiple vector species and tightly connected with sylvatic hosts in the SNSM region, rather than an isolated domestic transmission cycle. Therefore, integrated interventions targeting all vector species and their contact with humans should be considered.
| S-EPMC8192545 | biostudies-literature
Project description:Ikakogi is a behaviorally and morphologically intriguing genus of glassfrog. Using tadpole morphology, vocalizations, and DNA, a new species is described from the Sierra Nevada de Santa Marta (SNSM), an isolated mountain range in northern Colombia. The new taxon is the second known species of the genus Ikakogi and is morphologically identical to I. tayrona (except for some larval characters) but differs by its genetic distance (14.8% in mitochondrial encoded cytochrome b MT-CYB; ca. 371 bp) and by the dominant frequency of its advertisement call (2928-3273 Hz in contrast to 2650-2870 Hz in I. tayrona). They also differ in the number of lateral buccal floor papillae, and the position of the buccal roof arena papillae. Additionally, the new species is differentiated from all other species of Centrolenidae by the following traits: tympanum visible, vomerine teeth absent, humeral spines present in adult males, bones in life white with pale green in epiphyses, minute punctuations present on green skin dorsum, and flanks with lateral row of small, enameled dots that extend from below eye to just posterior to arm insertion. We describe the external and internal larval morphology of the new species and we redescribe the larval morphology of Ikakogi tayrona on the basis of field collected specimens representing several stages of development from early to late metamorphosis. We discuss the relevance of larval morphology for the taxonomy and systematics of Ikakogi and other centrolenid genera. Finally, we document intraspecific larval variation in meristic characters and ontogenetic changes in eye size, coloration, and labial tooth-rows formulas, and compare tadpoles of related species. Ikakogi tayrona has been proposed as the sister taxon of all other Centrolenidae; our observations and new species description offers insights about the ancestral character-states of adults, egg clutches, and larval features in this lineage of frogs.
| S-EPMC6506205 | biostudies-literature
Project description:The common snook Centropomus undecimalis is one of the main commercial fish species in the Caribbean region, including Colombia, where its populations have drastically decreased due to overfishing and environmental degradation. Thus, there is a market imbalance between the availability of snook products and their demand by consumers, which creates an opening for fraudulent actions such as species substitutions. Legislation in Colombia (and most Caribbean countries) lacks effective tools for the easy and rapid detection of frauds. Furthermore, there are very few studies published in scientific journals addressing this issue, of which none include C. undecimalis as the target species. Therefore, in order to investigate the existence of mislabeling in common snook products in Santa Marta, the present study analysed 44 frozen snook fillets from the five commercial brands available in the city. Moreover, 15 fresh snook fillets from six of the main fish markets were also analysed. To discover the frequency of possible frauds in labeling, samplings were carried out in July, September and November of 2019. Sample analyses involved the identification of each fillet at species level through molecular barcodes (16S-rRNA and COI), whose sequences were verified using BLAST and BOLD, and corroborated by a phylogenetic analysis. As a result, an astonishing 98% of the supermarkets fillets were found to be fraudulent, contrasting with a single case registered in the fish shop samples. The species used to substitute snook include the Pacific bearded brotula Brotula clarkae (38 samples), the Nile perch Lates niloticus (4 samples) and the acoupa weakfish Cynoscion acoupa (1 sample). Based on these results, there is a high rate of fraudulent labeling in the marketing of common snook in the city of Santa Marta, which calls for urgent actions to be taken by the corresponding authorities.
| S-EPMC8165420 | biostudies-literature
Project description:Emerging pollutants and priority substances are of growing concern due to their toxicity potential to aquatic organisms and human health. However, few reports on this issue in marine ecosystems in general and, more specifically, on the Colombian Caribbean coast are available. The aim of this study was to detect these compounds in sediments from Cartagena Bay (CB) and in the Grand Marsh of Santa Marta, GMSM (Ramsar site), in order to determine how they related to in vitro cytotoxicity assays on HepG2 cells of sediment extracts. A total of thirty compounds were detected using GC-MS/MS in fifteen stations during both the rainy and the dry seasons. Sediments from CB had a wide range of different toxicants, with polycyclic aromatic hydrocarbons (PAHs) being the most prevalent (12 PAHs, 5.5-881.6 ng/g). Total PCBs ranged from < LOD to 18.6 ng/g, with PCB 138 being the most common detected congener. Residues of p,p'-DDE, Chlorpyrifos and two organophosphate flame retardants, TEHP and ToTP, were found in most sampling locations. The UV filters 4MBC and homosalate were recurrently found in sediments, and the fragrance galaxolide appeared in all cases, with the greatest concentrations found on a touristic beach. In GMSM, with the exception of deltamethrin, all chemicals evaluated had lower average values than in CB. According to sediment quality guidelines, some sites in CB presented values of PAHs higher than the threshold effects level, while in the marsh, none of the stations exceeded it. HepG2 cells exposed to 1% sediment extracts presented reduced cell viability up to 26%. Cytotoxicity displayed a negative correlation with chlorpyrifos concentration. In short, these data suggest the bay and the marsh have specific contamination fingerprints related to anthropogenic interventions. This research highlights the need to further investigate the ecotoxicological implications of detected chemical stressors in these ecosystems.
| S-EPMC8382562 | biostudies-literature
Project description:This study reports the first case of fibropapillomatosis (FP) in the green turtle Chelonia mydas that has been successfully diagnosed and treated in Colombia. Worldwide, FP has reached epizootic proportions as it has been reported in marine turtles of tropical and subtropical waters, and in severe cases, it reduces the probability of survival. Treatment has been elusive as multiple surgical excisions are needed due to tumor recurrence. In this case, one green turtle with multiple tumors was diagnosed by histopathology and molecular detection of the chelonid herpesvirus 5 (ChHV5) by means of amplification and sequencing of the DNA polymerase (DNApol) gene. Two separate treatments that consisted of autogenous vaccines and surgical excisions were applied; the first one had a partial success as one out of the tumors treated reappeared after 3 months post-treatment. Treatment 2 consisted of an autogenous vaccine enriched with adjuvants and applied at increasing doses, after which, the tumor significatively decreased in size and was surgically removed. At the end of the 6 months follow-up period, no tumor recurrence was observed, and the turtle was in apparent optimal health conditions. These findings, although limited, suggest a possible treatment that might help to contain this epizootic problem.
| S-EPMC10880012 | biostudies-literature
Project description:We introduce Global Positioning System (GPS) Imaging, a new technique for robust estimation of the vertical velocity field of the Earth's surface, and apply it to the Sierra Nevada Mountain range in the western United States. Starting with vertical position time series from Global Positioning System (GPS) stations, we first estimate vertical velocities using the MIDAS robust trend estimator, which is insensitive to undocumented steps, outliers, seasonality, and heteroscedasticity. Using the Delaunay triangulation of station locations, we then apply a weighted median spatial filter to remove velocity outliers and enhance signals common to multiple stations. Finally, we interpolate the data using weighted median estimation on a grid. The resulting velocity field is temporally and spatially robust and edges in the field remain sharp. Results from data spanning 5-20?years show that the Sierra Nevada is the most rapid and extensive uplift feature in the western United States, rising up to 2?mm/yr along most of the range. The uplift is juxtaposed against domains of subsidence attributable to groundwater withdrawal in California's Central Valley. The uplift boundary is consistently stationary, although uplift is faster over the 2011-2016 period of drought. Uplift patterns are consistent with groundwater extraction and concomitant elastic bedrock uplift, plus slower background tectonic uplift. A discontinuity in the velocity field across the southeastern edge of the Sierra Nevada reveals a contrast in lithospheric strength, suggesting a relationship between late Cenozoic uplift of the southern Sierra Nevada and evolution of the southern Walker Lane.
| S-EPMC5114868 | biostudies-other
Project description:BackgroundIn the Neotropical Region, the mosquitoes, grouped in the tribe Sabethini (Arthropoda, Insecta, Diptera: Culicidae) are considered of medical importance by the role that some species may have in arbovirus transmission; also, because they are good bioindicators. More than 400 species are currently recognised and are mainly associated with forest areas. The tribe Sabethini is poorly studied and the information about diversity and distribution for species relating to it is scarce. In Colombia, 54 species of the tribe are known; however, several geographical areas have not been included in the studies for this group and data for recent field collections are not available; therefore, the records are outdated.New informationThis study presents the species list of the Sabethini tribe in Colombia, based on a review of previous publications and recent unpublished data. The list includes 68 species of nine genera and 16 subgenera. The genus Wyeomyia has the highest species number (39), followed by Sabethes (14). A total of 29 new records are registered and actualized information related to the local distribution in some Departments is presented, including geographic coordinates. In this paper, the distribution records of Sabethini for Colombia are updated, revealing the high diversity of this group in the country and providing some useful information for species that may need surveillance or control.
| S-EPMC8831386 | biostudies-literature
Project description:Aporinellus Banks, Austrochares Banks and Dicranoplius Haupt are new generic records for Colombia, as well as the species Dipogon ariel Banks, Evagetes peruana Banks, and Euplaniceps notabilis (Smith). Five new combinations are formally endorsed: Aimatocare argentinica (Banks), comb. n.; Aimatocare longula (Banks), comb. n.; Aimatocare imitator (Evans), comb. n.; Aimatocare impensa (Evans), comb. n.; Aimatocare vitrea (Fox), comb. n. Although these names have been used in Pompilidae, no formal nomenclatural act had been proposed. The presence of Chirodamus paramicola Roig-Alsina, previously reported with uncertainty, is confirmed. Finally, a new combination for Euplaniceps notabilis (Smith), comb. n. is proposed based on molecular phylogenetics and morphological data. The Colombian fauna of Pompilidae sums up to 38 genera and approximately 150 species.
| S-EPMC5396568 | biostudies-literature