Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation.
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ABSTRACT:
SUBMITTER: Alanzi ARA
PROVIDER: S-EPMC5680165 | biostudies-literature | 2017 Nov
REPOSITORIES: biostudies-literature
Publications
Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation.
Alanzi Ayed R A ARA Degnan James H JH
Molecular phylogenetics and evolution 20170802
Methods for inferring species trees from gene trees motivated by incomplete lineage sorting typically use either rooted gene trees to infer a rooted species tree, or use unrooted gene trees to infer an unrooted species tree, which is then typically rooted using one or more outgroups. Theoretically, however, it has been known since 2011 that it is possible to consistently infer the root of the species tree directly from unrooted gene trees without assuming an outgroup. Here, we use approximate Ba ...[more]
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