Unknown

Dataset Information

0

Draft genome and sequence variant data of the oomycete Pythium insidiosum strain Pi45 from the phylogenetically-distinct Clade-III.

ABSTRACT: Pythium insidiosum is a unique oomycete microorganism, capable of infecting humans and animals. The organism can be phylogenetically categorized into three distinct clades: Clade-I (strains from the Americas); Clade-II (strains from Asia and Australia), and Clade-III (strains from Thailand and the United States). Two draft genomes of the P. insidiosum Clade-I strain CDC-B5653 and Clade-II strain Pi-S are available in the public domain. The genome of P. insidiosum from the distinct Clade-III, which is distantly-related to the other two clades, is lacking. Here, we report the draft genome sequence of the P. insidiosum strain Pi45 (also known as MCC13; isolated from a Thai patient with pythiosis; accession numbers BCFM01000001-BCFM01017277) as a representative strain of the phylogenetically-distinct Clade-III. We also report a genome-scale data set of sequence variants (i.e., SNPs and INDELs) found in P. insidiosum (accessible online at the Mendeley database: http://dx.doi.org/10.17632/r75799jy6c.1).

SUBMITTER: Kittichotirat W 

PROVIDER: S-EPMC5681328 | biostudies-literature | 2017 Dec

REPOSITORIES: biostudies-literature

Json Xml
altmetric image

Publications

Draft genome and sequence variant data of the oomycete <i>Pythium insidiosum</i> strain Pi45 from the phylogenetically-distinct Clade-III.

Kittichotirat Weerayuth W   Patumcharoenpol Preecha P   Rujirawat Thidarat T   Lohnoo Tassanee T   Yingyong Wanta W   Krajaejun Theerapong T  

Data in brief 20171026

<i>Pythium insidiosum</i> is a unique oomycete microorganism, capable of infecting humans and animals. The organism can be phylogenetically categorized into three distinct clades: Clade-I (strains from the Americas); Clade-II (strains from Asia and Australia), and Clade-III (strains from Thailand and the United States). Two draft genomes of the <i>P. insidiosum</i> Clade-I strain CDC-B5653 and Clade-II strain Pi-S are available in the public domain. The genome of <i>P. insidiosum</i> from the di  ...[more]

Similar Datasets

Unknown Genome data of four Pythium insidiosum strains from the phylogenetically-distinct clades I, II, and III.
| S-EPMC8139067 | biostudies-literature
Unknown Draft genome sequences of the oomycete Pythium insidiosum strain CBS 573.85 from a horse with pythiosis and strain CR02 from the environment.
| S-EPMC5847485 | biostudies-literature
Unknown Data on whole genome sequencing of the oomycete Pythium insidiosum strain CBS 101555 from a horse with pythiosis in Brazil.
| S-EPMC6290497 | biostudies-literature
Unknown Probing the Phylogenomics and Putative Pathogenicity Genes of Pythium insidiosum by Oomycete Genome Analyses.
| S-EPMC5841299 | biostudies-literature
Unknown Draft genome sequence of the oomycete Pythium destruens strain ATCC 64221 from a horse with pythiosis in Australia.
| S-EPMC7346664 | biostudies-literature
Unknown The elicitin-like glycoprotein, ELI025, is secreted by the pathogenic oomycete Pythium insidiosum and evades host antibody responses.
| S-EPMC4368664 | biostudies-literature
Unknown The 74-kilodalton immunodominant antigen of the pathogenic oomycete Pythium insidiosum is a putative exo-1,3-beta-glucanase.
| S-EPMC2916248 | biostudies-literature
Unknown The Repurposed Drug Disulfiram Inhibits Urease and Aldehyde Dehydrogenase and Prevents In Vitro Growth of the Oomycete Pythium insidiosum.
| S-EPMC6658754 | biostudies-literature
Unknown Expression, purification, and characterization of the recombinant exo-1,3-β-glucanase (Exo1) of the pathogenic oomycete <i>Pythium insidiosum</i>.
| S-EPMC7306600 | biostudies-literature
Unknown The Immunoreactive Exo-1,3-β-Glucanase from the Pathogenic Oomycete Pythium insidiosum Is Temperature Regulated and Exhibits Glycoside Hydrolase Activity.
| S-EPMC4532416 | biostudies-literature