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Data on RNA-seq analysis of Garcinia mangostana L. seed development.


ABSTRACT: Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development.

SUBMITTER: Mazlan O 

PROVIDER: S-EPMC5694954 | biostudies-literature | 2018 Feb

REPOSITORIES: biostudies-literature

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Data on RNA-seq analysis of <i>Garcinia mangostana</i> L. seed development.

Mazlan Othman O   Abdul-Rahman Azhani A   Goh Hoe-Han HH   Aizat Wan Mohd WM   Mohd Noor Normah N  

Data in brief 20171107


Mangosteen (<i>Garcinia mangostana</i> L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 4  ...[more]

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