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Single-cell RNA sequencing reveals developmental heterogeneity among early lymphoid progenitors.

ABSTRACT: Single-cell RNA sequencing is a powerful technology for assessing heterogeneity within defined cell populations. Here, we describe the heterogeneity of a B220+CD117intCD19-NK1.1- uncommitted hematopoietic progenitor having combined lymphoid and myeloid potential. Phenotypic and functional assays revealed four subpopulations within the progenitor with distinct lineage developmental potentials. Among them, the Ly6D+SiglecH-CD11c- fraction was lymphoid-restricted exhibiting strong B-cell potential, whereas the Ly6D-SiglecH-CD11c- fraction showed mixed lympho-myeloid potential. Single-cell RNA sequencing of these subsets revealed that the latter population comprised a mixture of cells with distinct lymphoid and myeloid transcriptional signatures and identified a subgroup as the potential precursor of Ly6D+SiglecH-CD11c- Subsequent functional assays confirmed that B220+CD117intCD19-NK1.1- single cells are, with rare exceptions, not bipotent for lymphoid and myeloid lineages. A B-cell priming gradient was observed within the Ly6D+SiglecH-CD11c- subset and we propose a herein newly identified subgroup as the direct precursor of the first B-cell committed stage. Therefore, the apparent multipotency of B220+CD117intCD19-NK1.1- progenitors results from underlying heterogeneity at the single-cell level and highlights the validity of single-cell transcriptomics for resolving cellular heterogeneity and developmental relationships among hematopoietic progenitors.

SUBMITTER: Alberti-Servera L

PROVIDER: S-EPMC5730887 | biostudies-literature | 2017 Dec

REPOSITORIES: biostudies-literature

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Single-cell RNA sequencing reveals developmental heterogeneity among early lymphoid progenitors.

Alberti-Servera Llucia L von Muenchow Lilly L Tsapogas Panagiotis P Capoferri Giuseppina G Eschbach Katja K Beisel Christian C Ceredig Rhodri R Ivanek Robert R Rolink Antonius A

The EMBO journal 20171013 24

Single-cell RNA sequencing is a powerful technology for assessing heterogeneity within defined cell populations. Here, we describe the heterogeneity of a B220+CD117intCD19-NK1.1- uncommitted hematopoietic progenitor having combined lymphoid and myeloid potential. Phenotypic and functional assays revealed four subpopulations within the progenitor with distinct lineage developmental potentials. Among them, the Ly6D+SiglecH-CD11c<sup ...[more]

PMID: 29030486

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Single-cell RNA sequencing reveals developmental heterogeneity among early lymphoid progenitors.

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Single-cell RNA sequencing reveals developmental heterogeneity among early lymphoid progenitors.

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