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Chemical biology of genomic DNA: minimizing PCR bias.


ABSTRACT: The exquisite selectivity of chemical reactions enables the study of rare DNA bases. However, chemical modification of the genome can affect downstream analysis. We report a PCR bias caused by such modification, and exemplify a solution with the synthesis and characterization of a cleavable aldehyde-reactive biotinylation probe.

SUBMITTER: McInroy GR 

PROVIDER: S-EPMC5759930 | biostudies-literature | 2014 Oct

REPOSITORIES: biostudies-literature

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Chemical biology of genomic DNA: minimizing PCR bias.

McInroy Gordon R GR   Raiber Eun-Ang EA   Balasubramanian Shankar S  

Chemical communications (Cambridge, England) 20141001 81


The exquisite selectivity of chemical reactions enables the study of rare DNA bases. However, chemical modification of the genome can affect downstream analysis. We report a PCR bias caused by such modification, and exemplify a solution with the synthesis and characterization of a cleavable aldehyde-reactive biotinylation probe. ...[more]

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