Ontology highlight
ABSTRACT:
SUBMITTER: Lam PC
PROVIDER: S-EPMC5767200 | biostudies-literature | 2018 Jan
REPOSITORIES: biostudies-literature
Lam Polo C-H PC Abagyan Ruben R Totrov Maxim M
Journal of computer-aided molecular design 20170908 1
Ligand docking to flexible protein molecules can be efficiently carried out through ensemble docking to multiple protein conformations, either from experimental X-ray structures or from in silico simulations. The success of ensemble docking often requires the careful selection of complementary protein conformations, through docking and scoring of known co-crystallized ligands. False positives, in which a ligand in a wrong pose achieves a better docking score than that of native pose, arise as ad ...[more]